Mycolicibacterium holsaticum: K3U96_02410
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Entry
K3U96_02410 CDS
T07607
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mhol
Mycolicibacterium holsaticum
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mhol03000
]
K3U96_02410
Transcription factors [BR:
mhol03000
]
Prokaryotic type
Helix-turn-helix
Other families
K3U96_02410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_14
HTH_8
GAF
HTH_30
HTH_50
HTH_22
HTH_29
HTH_7
nSTAND_NTPase5
HTH_23
Sigma54_activat
HVO_A0261_N
Phage_AlpA
HTH_28
AAA_16
HTH_Tnp_ISL3
Xre-like-HTH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QZA13068
LinkDB
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Position
complement(487413..489200)
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AA seq
595 aa
AA seq
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MSSQASDLVEVERAREKFLSAGILDAGESMDAGVLPANIVESWRRSQFLRVCPDRVELPY
VGEPDKDSRLACAAAPVLQSVTDDLAAQAVSVVLTSTNGVVLERSAAEVSILHALDKVGL
APGYSLAEDVAGTNGIGTTLETAQPAFIRGGEHYVAMFTGFTCAGAPIRDPVTGRLIGAL
NLSCLARQSDPVLQALATSAGRQIEDRMREVARETETALLEAYLRQTRRSSRGVLAMGGD
VVLINPYLRRVLDGNEQAALVEHGADLLTSTLSRAALAVLPSGRIAKLTAADRTTLRDGR
ANVVFHVDLSAEAGSPTSRAGHPARTHIPGLAGRSVAWLRCCEQVRRCCQNQDWVIVEGE
KGSGRSRLAQAVGQHVKPGRTVRVMRAGTFPNAASFVAELAAQSCDQDFAVVIADVDDID
KDTLEPITSMLAARAGHGWIAATTSGATPAAAITKLLLPLFTHTVRVPALRHRIEDLEEL
VPLLLRDISRGADVKMAPEAMHQLSRLPWPGNVAQLRRVLTETVARQRSGVINADMLPPE
CRSVTRRKLSQMEALERDAIVRSLRDNGGNKQDAARTLGMSRATIYRKINDYGIA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcaggccagcgacttggtcgaagtcgagcgggccagggaaaaattcctgtcc
gcggggatccttgacgccggcgagtcgatggatgccggcgttctgcccgccaatatcgtg
gagtcctggcgtcggtcccagttcctgcgcgtatgccctgaccgggtcgaactgccctac
gtgggcgaacccgacaaggattcacggttggcctgtgcggccgctccggtgctgcagagt
gtcaccgacgatctggctgcgcaggcggtcagcgtcgtcttgacatccaccaacggtgtg
gtcctcgaacggagcgccgcagaagtgtccatccttcacgcgctggacaaggtcggtctc
gcaccgggctacagcttggcggaagacgtggcgggcaccaacgggattggcacgacgttg
gagactgcgcagcccgccttcatccgcggaggtgagcactacgttgcgatgttcaccgga
ttcacgtgtgcgggggcgccgatccgggaccccgtgacgggcaggctgatcggtgcgctc
aatttgagttgtctcgccaggcaatcagatccggtgttgcaagcgttggctaccagcgcc
ggtcgccagatcgaggaccgtatgcgggaggtggcgcgcgagacagagaccgcgctgttg
gaggcatacctgcggcagacgcgacgatcgtctcgcggcgtgctcgcgatgggcggcgac
gtggtgttgatcaacccctacctacgtcgggtactcgacggtaacgagcaggccgcgctg
gtcgagcacggcgccgatctgctgacctccacgctgtcgcgcgccgcccttgcggtgctg
ccgagcgggcgcatcgccaagctcaccgccgctgatcgcacgacgctgcgcgacgggcgc
gccaacgtcgtgttccacgtcgacctttccgccgaagccggctcgcccacttcacgagcc
ggccacccggcacgcactcacatccctgggctggcaggtcgcagcgtcgcatggctgcgc
tgctgcgagcaggtgcggcgatgctgtcagaaccaggactgggtgattgtggaaggagaa
aagggatccggtcgctcgcggctggctcaggcggtgggacagcacgtcaagccgggccga
accgttcgggtcatgcgcgccgggacgttccccaacgcggccagtttcgtcgccgaactg
gccgcccagtcctgcgaccaggacttcgcggtggtgatcgccgacgtggacgacatcgac
aaggacacgctcgagccgatcacgtcgatgctggccgcgcgcgctggccacggctggatc
gcggctaccaccagcggcgcgacgcccgcggcggcaatcacgaaactattgctgccattg
ttcacccacaccgtcagggtgcctgcgctgcgacaccgcatcgaggacctcgaagaactc
gtgccgctgctgctgcgcgacatcagccggggtgctgatgtcaagatggctcccgaagcc
atgcaccagctcagcaggctgccgtggccgggcaacgtcgcccagcttcggcgggtgctg
accgaaaccgttgcccgccaacgatccggcgtcatcaacgcggacatgttgccgccggag
tgccgctccgtcacgcggcgcaagctgagtcaaatggaagccctggagcgcgacgcgatc
gtccggagcctgcgggacaatggcggaaacaagcaagacgcggcgcgcaccctgggaatg
tcacgcgccaccatctaccgcaagatcaacgactacggcatcgcatga
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