Mycolicibacterium holsaticum: K3U96_03325
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Entry
K3U96_03325 CDS
T07607
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhol
Mycolicibacterium holsaticum
Pathway
mhol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3U96_03325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhol03019
]
K3U96_03325
03400 DNA repair and recombination proteins [BR:
mhol03400
]
K3U96_03325
Enzymes [BR:
mhol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3U96_03325
Messenger RNA biogenesis [BR:
mhol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3U96_03325
DNA repair and recombination proteins [BR:
mhol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K3U96_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
KORA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QZA13228
LinkDB
All DBs
Position
677103..679181
Genome browser
AA seq
692 aa
AA seq
DB search
MTTREQAQAILGQLAGPHAALRDDQWTAIEALVVHRRRALVVQRTGWGKSAVYFIAAKLL
RAAGHGPTVIVSPLLALMRNQVGAADRAGVHAATINSSNVAEWDDIHRRVHAGELDVLLV
SPERLNNPDFRDTVLPALAKDAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIAELGADIPV
LATTATANDRVVEDVAAQLGVGGGDTLVLRGGLDRASLRLSVVKAGSPAQRAAWLAAHLA
SLPGSGIVYTLTVAQAHDIAALLREQGHPVAAYTGSTEAAEREQLEADLLANRVKALIAT
SALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRSTESAEVVLLPGSEDQEVWRYFAS
VAFPPEALVRKVIRELDADRPLSSAALEPLVDLNRTRLEMVLKVLDVDGAVRRVKGGWLG
TGQEWTYDEARYRKLDEARKREQQAMLDYQATDGCRMAFLRAQLDDPELARDERCGRCDN
CTGARYDTVVDATAEQDVKARLMRPGVELTPRKQWPTALSRLGLDLKGRIGDGPEIGRVL
GRLTDLGWGARLRRLLDEPDAQVPAEVVDAAVQVLASWNWQTRPTAVMALDSDTHPLLIA
SLARELARLGRLTDLGVLRYAPGRRPVTAANSAYRVAALDGAWEPPDLSGVTGPVLLVDD
VTDTGWTLTMASRVVRAAGATEVLPFALASTS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgcgagagcaggcccaggcgatcctcgggcagctggcagggccgcacgccgcg
ctgcgcgacgaccagtggacggccatcgaggcattggtggtgcaccggcggcgcgcgctc
gtcgtgcagcgcaccggctggggtaagtccgcggtgtacttcatcgccgccaagctgttg
cgtgccgccggccacggcccgacggtgatcgtctcaccgctgctggcgctgatgcgcaac
caggtgggtgccgccgaccgggcgggtgtccacgccgcgaccatcaactcgagcaacgtc
gccgagtgggacgacatccaccgccgggtacacgccggtgaactcgacgtcctgctggta
agcccggaacggttgaacaaccccgactttcgtgacacggtactgcccgcactggccaag
gacgccgggctggtggtggtcgacgaggcgcactgcgtatcggactggggccatgacttc
cggcccgactaccggcggatccgcacgctgatcgccgaactgggcgccgacatcccggtg
ctggccaccaccgcgaccgccaacgaccgggtggtcgaggacgtcgcggcgcagctgggc
gtcggcgggggtgacacgctggtgttgcgcggcggccttgaccgcgcgtccctgcggctc
tcggtggtcaaggcgggaagccccgcgcaacgtgcggcttggcttgccgcgcatttggct
tcgctgcccggctcgggcatcgtctacacgctcaccgtcgcccaggcccacgacatcgcc
gcactgctgcgcgaacaggggcatccggtcgcggcctacaccggttcgaccgaggccgca
gagcgtgaacaactcgaggcggacctgctggccaaccgggtcaaggcgctgatcgccacg
tcggcgctcggcatgggctttgacaaacccgacctcgggttcgtcgtgcatctcggcgcg
ccgtcctcgcccatcgcctactaccaacaggtcgggcgcgctggccggtccaccgagagc
gccgaggtggtgttgctgcccgggagcgaggaccaggaggtctggcggtacttcgcatcc
gtggcgtttccgccggaagcattggtgcgcaaggttatccgggaactcgatgcggatcgg
ccgctgtcgagcgcggccctggagccactcgtcgacctcaaccggacccggctggaaatg
gtgttgaaagtgctcgacgtcgacggtgcggtgcgccgcgtcaagggcggctggctgggc
accgggcaggagtggacctacgacgaagcgcgctaccgaaagctcgacgaggcgcgcaaa
cgcgaacagcaggcgatgctcgactaccaggccaccgacggctgccggatggcgttcctg
cgggcccaactcgacgatcccgaacttgcccgcgacgaacgctgcggccgctgcgacaac
tgcacgggcgcgcgctacgacaccgtcgtcgacgccacggccgaacaggacgtcaaggcg
cggctcatgcggcccggggtggagctcacgccgcgcaagcagtggcccacggcgttgagc
aggctcgggctggatctgaagggccgaatcggcgacggcccggaaatcgggcgggtgctg
gggcggctgaccgatctcggatggggtgcgcggttgcgccgcttgctcgacgaacccgat
gcgcaggtgcccgccgaagtcgtcgacgcggcggtgcaggtgctggcctcgtggaactgg
cagacccgcccgaccgcggtgatggcgctggattcggacacccaccccttgctgatcgcc
tcgctggcccgcgagctcgcccgcctcggccggctgaccgatctgggagtgctgcgctac
gcgcccgggcgccggccggtgaccgcggcgaactcggcctaccgcgtagctgcgctggac
ggtgcgtgggagccgcccgacctgtccggggtcacgggcccggtgctgctggtggacgac
gtgaccgacacgggctggacgctgacgatggcgtcgcgggtggtcagggccgctggggcg
accgaggtgctgccgtttgcgctggccagcacgagctga
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