Mycolicibacterium holsaticum: K3U96_04185
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Entry
K3U96_04185 CDS
T07607
Name
(GenBank) VCBS domain-containing protein
Organism
mhol
Mycolicibacterium holsaticum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Vgb_lyase
Big_9
YNCE
SGL
Cadherin_4
Beta-prop_EML_2
WD40_WDHD1_1st
US22
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-ProteinID:
QZA13378
LinkDB
All DBs
Position
complement(836132..839662)
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AA seq
1176 aa
AA seq
DB search
MKASRVIGRVGGLAVALGVGAAVSLAGPAAAWADDSGSTTSGETATSATDTGRTDDTAAA
QDGSASTTTTTTDNEQTATTDADAESSAEPVEHHTSTPMGELVRRMPRGLVIATGGAHTS
KPGRKGAALNDVTDESATVTKEPAGRSAWQERRLEVAGSQGEDADATAVVRRAQRSWQEI
SPPQPDTAAADDPAPAVVEKNPVTFETTTLAAAPVEVETQKISTPATEPTQPPNTLGAVV
LAALARVGGAPQAPEDPLTPANSPFELALLALGARPRPFGPSANGVSAVDSAVITATAAP
RFVNKPSIPVGVNPTGVVISTDGRMFVANTGSGTVSVIDTATGQRIDAAPNSSSSMDIRV
GSAPSALALSPDNTRLYVANTGSGTVSVIDTTTYVRVDANPSVLSMDIRVGIAPSALAFG
SDGRLYVANRAGKSVSVIDTTTNSLVDTNPNARGVQSISVGSSPSALAAGPDGRVYVANR
GSNSVSVINTTNFSVTKTVAVGKQPSSVALGADGKLFVVNQGSNTVSVIDTATDTVVDVN
PNAAGVNHVSVGPSPSSVALSPDGRFAYVTNTNDTISVIDTAAYAVVGTEAIDTDRIGAH
VVAVGADGTVYVTDAADRTVRVLAHQGNTAPRADTPTVGTPDTTTGAVSGALNFTDPDGD
PLSYSVTQPTSGTVTITPTGAYTYTPTQAAREQATQTPGRDSATFVVNASDGEATATVTV
TVPVAPLSAEPGGPPIDVSLPGTLSGTFANTDGTHAVITSYAIDEDGSETTWAAVVNLVT
GDQIGTTITLPGSQAGTVVTNDGTRALIVTYDADATRGVMIDLANGTQAGPTITLTDRLT
SVELSPDGSRALLGGVTIDENTGVHTNRIAVIDLATGSQKGTTVTYTGDLSLILPVTANA
DHVLLSINFYDGRTSTNTLRVIVIDSTTGAQIGAGLELTGHQSLGAALISPDGSRAVFST
SHVTSTANTTSVAVINTATGNQVGTTLTFSGYGYMQMSDDGSRVVVATITSTNTPDLKTQ
VAVLDTAAGSAVRTTLSGGVWREPVFTADGTRVLVKTVVYRLFGGGQATRLTVLDTRTGR
PINLALTVAGSPISEVSTPDGTRAVIVTWTLENDFTSTYRVAAINTITGRQVGTTLTFTG
GSAGLPPTAELSADGSEALITTFIDGVPEVTVLRIV
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcatcacgtgtcatcggacgtgtcggcggtttggcggtggcgctcggggtgggc
gcggcggtgtcgctggccggccccgcggcggcgtgggccgacgattccgggtccaccact
tcgggtgagacggctaccagcgcgacggacaccggccggaccgacgacaccgcggctgcc
caagacggctctgccagcaccaccacgacaaccacggacaacgaacagaccgcaaccacc
gacgccgacgccgaaagttcggccgaacccgtcgaacatcacacctcgacgccgatgggc
gagttggtgcggcggatgccgcggggactggtcatcgccaccggtggtgcacacacctcg
aagccgggccgcaagggcgcggcgctcaacgacgtcactgacgaatcagccacggtgaca
aaggaaccggcaggtcgatcggcctggcaggagaggaggctcgaggtggcgggttcacag
ggcgaggacgctgacgcgaccgcggtggtgcgacgggcgcaacgttcgtggcaggagatc
tcgccaccccagccggacaccgccgccgcagacgacccggccccggccgttgtcgagaag
aaccccgtgacattcgagacgaccacgcttgccgcagcgcccgtcgaggttgagacgcag
aagatctcgacccccgccacggagccgacccaacctcccaacacgttgggcgcggttgtg
ctggccgcgttggcccgggtgggcggggctccgcaggcacccgaggatccgctgacaccg
gcgaactcgccgttcgaactggcgctgctggccctcggtgcccggccacgccccttcggc
ccgtcggccaacggcgtaagcgccgtcgattcggcggtgatcaccgcgaccgcggcacct
cggtttgtgaacaagccgtcgataccggtcggtgtcaaccccaccggcgtggtgatcagc
acggatggtcggatgttcgtggccaacaccggcagcggcaccgtgtcggtcatcgacacc
gcaaccggccaacggatcgacgctgccccgaactcgtcatcgtcgatggacatccgggtg
gggtccgcaccgagcgccttggcgctgagccccgataacacgcggttgtatgtggccaac
accggcagcggcacggtgtcggtgatcgacaccaccacctacgtgcgtgtcgacgccaac
ccgagcgtcttgtcgatggacatcagggtcggaatcgcgccaagcgcgctggccttcggt
tccgacggtcggctgtacgtggccaaccgcgccggcaagagcgtgtcggtgatcgacacc
accaccaacagcctggtcgacaccaacccgaacgcgcgcggagtgcagtcgatttcggtg
ggctcctcaccgagcgcgctggcggccggccccgacggcagggtctatgtcgccaaccgc
ggcagcaactcggtgtcggtgatcaacacgacgaacttcagcgtcaccaagaccgtcgcc
gtcggaaagcaaccgtccagcgtggcactcggcgccgacggcaagttgtttgtcgtcaac
cagggcagcaacacggtttcggtgatcgacaccgctaccgacaccgttgtcgacgtcaac
cccaacgccgctggggtgaaccatgtttcggttgggccctcgcccagctcggtggcgttg
agccccgacggccgatttgcctacgtcaccaacacgaacgacaccatctcggtgatcgac
accgccgcctacgccgtcgtcggcaccgaagcgatcgacaccgaccgcatcggtgcgcac
gttgtcgccgtcggcgccgacggcaccgtctacgtcaccgacgccgccgaccgcaccgtg
cgcgtcctggcccaccagggcaacaccgcacccagggccgacacacctaccgtcggcacg
cccgacaccaccacaggcgcggtcagcggagcactgaacttcaccgaccccgacggagac
cccctgtcgtacagcgtgactcaacccaccagcggtaccgtcaccatcactccgaccggc
gcctacacgtacacccccacccaagcggcacgagaacaggccacgcaaaccccgggccgg
gattccgccacattcgtcgtcaacgccagcgacggcgaagccaccgcaaccgttaccgtc
accgtgcccgtcgcaccgctcagcgccgagccgggtgggccccccatcgacgtctccttg
cccggcacactgtcaggcaccttcgcgaacaccgacggcacccacgccgtcatcacctcg
tatgccatcgacgaggacggcagcgaaaccacatgggccgccgtggtcaacctcgtcacc
ggcgaccagatcggcaccacgatcaccttgccgggctctcaggcgggcacagtcgtgacc
aacgacggcacccgggctttgatcgtgacctacgacgccgatgcgacccggggcgtaatg
atcgatctggccaacgggacccaggcgggccccacgatcacgctgaccgacaggctcacc
tccgttgagttgagccctgacggtagccgcgctctactgggcggtgtaaccatagacgag
aacaccggggtccacaccaaccgcatagcggtcatcgatctcgcgaccggctcccagaag
ggaaccaccgtcacatacaccggcgacctatccctcattcttccggttaccgccaacgca
gaccatgttctgctcagcatcaacttttacgatggccgaacaagcacgaatacgctgcgg
gtcatcgtgatcgacagcaccaccggcgcccaaatcggcgccggcctggaactgaccggt
caccagtcactgggcgcggctctgataagccccgacggaagccgcgccgtgttctccacg
agccacgtcaccagcaccgccaacaccacttcggtggcggtgatcaacaccgccaccggc
aatcaagtcggcactacgctgacgttcagcggctacggctatatgcaaatgagcgacgat
ggcagccgggttgtcgttgcgacgatcacgtcgaccaacacgccggacctcaaaactcaa
gtggcggttttggatacggctgccggcagcgccgtgcgcaccaccctctccggcggggtg
tggcgagaaccggtattcaccgccgacggcacccgcgtattggtcaagaccgtcgtctac
agactgttcggtggcggccaagccacccgactcacggttcttgacacgaggaccggtagg
ccgatcaacctggccctcaccgtggccgggtcgccgatctcggaagtatcgaccccggac
ggcaccagggcggtgatcgtgacctggacgcttgagaacgacttcacatccacctatcgg
gtggcggcgatcaacaccatcaccggcaggcaggtcggcaccaccctcacattcaccggg
ggcagcgcgggcctaccgcctacggccgaactgagcgccgacggtagcgaggccctgatc
accacgttcatcgacggcgtccccgaggtgacagtgctgcggattgtctag
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