Mycolicibacterium holsaticum: K3U96_04270
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Entry
K3U96_04270 CDS
T07607
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mhol
Mycolicibacterium holsaticum
Pathway
mhol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K3U96_04270
09124 Replication and repair
03420 Nucleotide excision repair
K3U96_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhol03021
]
K3U96_04270
03400 DNA repair and recombination proteins [BR:
mhol03400
]
K3U96_04270
Enzymes [BR:
mhol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3U96_04270
Transcription machinery [BR:
mhol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K3U96_04270
DNA repair and recombination proteins [BR:
mhol03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K3U96_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
QZA13395
LinkDB
All DBs
Position
complement(858630..860279)
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHAQAGEARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVIVHNSERGRVKQMLLKIGWPAEDLAGYVDGEKHPISLAQDGW
HLRDYQEMATESFWAGGSGVVVLPCGAGKTLVGAAAMAKASATTLILVTNTVAGRQWKRE
LINRTSLTENEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDNERMLYAVAEPDERYKLCSTVHTKIAVVKSILDKHQGEQTLVIGAYLD
QLEELGAELNAPIIQGSTKTAERETLFDAFRRGEISTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAIFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggccccttgatcgtgcagtccgacaaaaccgtgctgctcgaagtcgaccac
gcccaggcaggcgaggcgcgcgcagccatcgcgccgttcgccgagctcgaacgcgcgccc
gaacacatccacacctaccgcatcacgccgcttgcgctgtggaatgcgcgtgcggcaggc
cacgacgccgagcaggtggtcgacgcgctggtgagcttctcgcgttacgcggtgccgcag
ccgctgctcgtcgacatcgtcgacaccatggcccgctacgggcgcctgcagctggtcaaa
catccggcccacgggctgacgctggtcagcctggaccgcgcggtgctcgaggaggtgctg
cgcaacaagaagatcgcaccgatgctcggcgcgcgtatcgacgacgacaccgtcatcgtg
cacaacagcgaacggggccgcgtcaagcagatgctgctcaaaatcggctggccggccgag
gatctggccggctacgtcgacggcgagaagcacccgatcagcctggcccaggacggttgg
cacctgcgcgactaccaggaaatggccaccgagtcgttctgggcgggcggctcaggtgtc
gtggtgttgccgtgcggggcgggtaagacgctcgtcggcgcggccgcgatggccaaggcc
tcggccaccaccttgatcctggtcaccaacacagtcgcgggtcggcagtggaaacgcgag
ctgatcaaccggacgtcgctcaccgagaacgagatcggcgagtactccggggagcgcaag
gagatccggcccgtcaccatcgcgacctatcaggtgatcacccgccgcaccaagggcgag
taccgccacctggagttgttcgacagccgcgactgggggctgatcatctacgacgaggtg
cacctgctgcccgcgccggtgttccggatgaccgctgacctgcagtcccgacgccggctg
ggcctgaccgcgacgctgatccgcgaggacggccgggagggcgacgtgttcagcctgatc
gggcccaagcgctacgacgctccgtggaaggacatcgaggcccagggctggatcgccccc
gccgagtgcgtcgaggttcgcgtgacgatgaccgacaacgagcgcatgctctacgcggtc
gccgaacccgacgagcgctacaagctgtgctcgacggtgcacaccaagatcgcggtggtg
aagtcgattctggacaagcatcagggcgaacagacgctggtgatcggcgcctacctggac
cagctcgaagagctcggcgcggagttgaatgccccgatcatccagggctcgaccaaaacc
gcggaacgcgaaacgctgttcgacgcgtttcgccgcggtgaaatctccaccctggtggtc
tcgaaggtggccaacttctcaatcgacctacccgaagccagtgtggcggttcaggtttca
ggaacgttcggttcccgtcaagaggaggctcagcggctgggccggctgttgcgccccaag
gctgacggcggcggcgccatcttctactcggtggtgtcgcgcgacagcctggacgccgag
tacgccgcgcaccgtcagcgtttcctcgccgaacagggctacggatacgtgatcaaagac
gccgacgacctactgggcccggccatttga
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