Mycolicibacterium holsaticum: K3U96_06085
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Entry
K3U96_06085 CDS
T07607
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
mhol
Mycolicibacterium holsaticum
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhol03021
]
K3U96_06085
Transcription machinery [BR:
mhol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K3U96_06085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
Sigma70_ECF
MarR_2
HTH_3
HTH_Crp_2
HTH_10
HTH_20
UPF0122
DUF134
HTH_24
HTH_31
DUF7343
T3SS_needle_E
HTH_37
Se-cys_synth_N
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QZA13713
LinkDB
All DBs
Position
complement(1254251..1255036)
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AA seq
261 aa
AA seq
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MARFSGDYKDVTDMFRRLKTLPEGSAQFRRQRDAIIERCLPLADHIAFRYRDRGEPLDDL
IQVARVGLLNAVNRYDVDTGAEFLSFAVPTLMGEVRRHFRDHGWAVKVPRRCKDIQAQLV
RARAELTQELGRAPNASEIAKHLDVPRELVVDATIASSNYSTLSTDVQAGPNDDSRAVMD
TLGDVDPGMDKVLDLETIRPLIAALPERQRTLLTLRFFEDLTQTQIAERMGISQMHVSRL
LSKSINTLRRQVQLPELAAAG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttttctggcgattataaagatgtgacggacatgttccgtcggctcaaaaca
ctccccgagggatcggcgcaattccggcgtcagcgcgacgcgatcatcgagcggtgcctg
ccgctggccgatcacatcgccttccgttaccgcgaccgcggcgaaccgcttgacgatctc
attcaggtggcacgtgtcggcctgctcaacgcggtcaaccgctacgacgtggacactggc
gcggagttcctgtcgttcgccgtgcccacgctgatgggtgaggtgcgccgccacttccgc
gatcacggatgggcggtcaaggtgcccagacgatgcaaggacatccaggcacagctggtg
cgggcgcgcgcagagttgacccaggagctgggtcgcgcgccgaacgcctcggagatcgcc
aaacatctcgacgtgccccgtgaattagtggtcgacgcgacgatcgccagcagcaactac
tcgacattgtcgacagacgtgcaggccgggcccaacgacgactcacgcgcggtcatggac
acgctcggcgacgtcgaccccgggatggacaaggtgctggacctcgagacgatccgcccg
ctgatcgccgcactgccggaacgccagcgcacacttctgacgctgcggttcttcgaggac
ctgacccagacgcagatcgccgagcgcatggggatctcgcagatgcacgtctcgcggctg
ctgtccaagtcgatcaacaccctgcgacggcaggtgcaactgcccgaattggcagctgcc
ggttag
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