Mycolicibacterium holsaticum: K3U96_06760
Help
Entry
K3U96_06760 CDS
T07607
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mhol
Mycolicibacterium holsaticum
Pathway
mhol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3U96_06760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhol03019
]
K3U96_06760
03009 Ribosome biogenesis [BR:
mhol03009
]
K3U96_06760
Enzymes [BR:
mhol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K3U96_06760
Messenger RNA biogenesis [BR:
mhol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K3U96_06760
Ribosome biogenesis [BR:
mhol03009
]
Prokaryotic type
rRNA helicases
K3U96_06760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
HEM4
CMS1
P-loop_SecA
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QZA13829
LinkDB
All DBs
Position
1390772..1392484
Genome browser
AA seq
570 aa
AA seq
DB search
MTSSESDTNQAPPTAELTFSDLQIHPAVLQAVADVGYESPSAVQAATIPAMMAGSDVVGR
AQTGTGKTAAFAIPILSKIDPDNRATQALVLAPTRELALQVAEAFGRYGAHLPKINVLPI
YGGSSYGPQLAGLKRGAQVVVGTPGRVIDHLEKGRLDLSHLDYLVLDEADEMLQMGFVED
VERILAETPEYKQVALFSATMPSAIRKITTKYLHDPVEVTVKSKTATAENISQRYIQVAG
HRKMDALTRVLEVEEGDAMIVFVRTKQATEEVAERLRSRGFSAAAINGDIPQAQRERTIA
ALKDGSIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALLFV
TPRERHLLKAIEKATRSKLVEADLPTVEDVNAQRVAKFRDSITDALNAPGVDLFRSMIED
YERENDVPMVDIAAALAVQSRDGEQFLMSEPPPEKRRRDERPERAERPDRGPRQARRPGQ
GFATYRIAVGKRHKVSPGAIVGAIANEGGLNRSDFGHISIRPDHSLVELPAKLSRETVKA
LERTRIQGILINLQPDRPPRKGGKPSRKSK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctctgagtcggacacgaaccaggcacctccgactgccgaattgaccttttct
gacctgcagattcacccggcggtgctgcaggccgtcgccgacgtcggatatgagtcgccg
tccgcggtccaggcggccaccatcccggcgatgatggccggctccgacgtggtcggccgg
gcccagaccggcaccggcaagaccgccgccttcgccatcccgatcctgtcgaagatcgat
cccgacaaccgggccacccaggcgctcgtgctggctcccacgcgcgagttggcgctgcag
gtcgccgaggcgttcggacggtacggcgcgcacctgcccaagatcaacgtgctgccgatc
tacggcggatcgtcctacggcccgcagttggcggggctcaagcgcggtgcacaggtcgtc
gtcggcacccccgggcgggtgatcgatcacctggagaagggccggttggacctgtcgcat
ctggactatctggtgctcgacgaggccgacgaaatgctgcagatgggcttcgtcgaggac
gtcgagcggatcctggccgagacccccgagtacaagcaggtggcgttgttctcggcgacg
atgccgtccgcgatccgcaagatcaccaccaagtacctgcacgaccccgtcgaggtcacg
gtcaagtcgaaaactgcgaccgccgagaacatttcccagcgctacatccaggtcgccggg
caccgcaagatggacgcgctgacccgggtgctggaggtggaagagggcgacgcgatgatc
gtgttcgtccgcaccaagcaggccaccgaggaagtggccgaacggctgcggtcgcgcggc
ttctccgcggccgccatcaacggcgacatcccgcaggcgcagcgcgaacgcaccatcgcc
gcgctgaaagacggcagcatcgacatcctcgtcgccaccgatgtcgccgcgcgcgggctc
gacgtcgagcggatctcccacgtcctgaactacgacatcccccacgacaccgagtcgtac
gtgcaccgcatcgggcgcaccgggcgggccggccgctcgggtgcggcgctgctgttcgtc
accccacgggaacggcacctgctcaaggccatcgaaaaagccacccgctccaagctcgtc
gaagccgacctgccgactgtcgaagacgtcaacgcccagcgcgtcgccaagttccgcgac
tcgatcaccgatgcgctcaacgcgcccggagtcgacctgttccgcagcatgatcgaggac
tacgagcgcgaaaacgacgtccccatggtcgatatcgccgcggcgctcgcggtgcagtcc
cgggacggcgagcagttcctgatgtcagaaccgccgccggagaagcgtcgccgcgacgag
cggcccgaacgtgccgagcggcccgaccgcggacccagacaagcccgccgacccggacag
ggcttcgccacgtatcgcatcgcagtgggcaagcggcacaaggtgagtccgggcgcgatc
gtcggcgccatcgccaacgagggcgggctgaaccgcagcgacttcgggcacatctcgatc
cggcccgatcattcgctggtggaactgcctgccaagctgtcccgcgagacggtgaaagcc
ctggagcgcacccgcattcagggcatcctgatcaacttgcagcccgaccgtccgccacgc
aagggcgggaaacccagccgcaaatcgaaatga
DBGET
integrated database retrieval system
