Mycolicibacterium holsaticum: K3U96_13550
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Entry
K3U96_13550 CDS
T07607
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mhol
Mycolicibacterium holsaticum
Pathway
mhol03030
DNA replication
mhol03410
Base excision repair
mhol03420
Nucleotide excision repair
mhol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K3U96_13550 (polA)
03410 Base excision repair
K3U96_13550 (polA)
03420 Nucleotide excision repair
K3U96_13550 (polA)
03440 Homologous recombination
K3U96_13550 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhol03032
]
K3U96_13550 (polA)
03400 DNA repair and recombination proteins [BR:
mhol03400
]
K3U96_13550 (polA)
Enzymes [BR:
mhol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K3U96_13550 (polA)
DNA replication proteins [BR:
mhol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K3U96_13550 (polA)
DNA repair and recombination proteins [BR:
mhol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K3U96_13550 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3U96_13550 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QZA15017
LinkDB
All DBs
Position
complement(2808959..2811703)
Genome browser
AA seq
914 aa
AA seq
DB search
MSSATTAADKKPGSAPGAEQKPTLMLLDGNSLAYRAFYALPAENFKTRGGLTTNAVYGFT
AMLINLLRDEQPSHIAAAFDVSRQTFRVDKYPEYKAGRSSTPDEFRGQIDITKEVLGALG
ITVLAEPGFEADDIIATLATQAEDAGYRVLVVSGDRDSLQLVSDDVTVLYPRKGVSELTR
FTPEAVVEKYGLTPRQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYGSLQELVDNVD
AVKGKVGDALRAHLSSVVLNRELTDLVKDVPLAQTPDTLRMQPWNRDQIHRLFDDLEFRV
LRDRLFETLASADPEVDQGFDIRGGALEPGELAGWLAEHSLGNRFGLAVVGTHQAFDGDA
TAVAIVAADGEGRYLDTATLIPEDEAALASWLADPGSPKALHEAKLAMHDLEGRGWTLAG
VTSDTALAAYLVRPGQRSFTLDDLSLRYLRRELRAEKPEQQQLSLLDDSDGVDDQAVQTL
ILRASAVMDLADALDEELARIDSLALLNNMELPVQRVLAEMETAGIAVDLERLGELQSEF
ADQIRDAAEAAYAVIGKQINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLFDK
TGHPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIP
IRTEAGRRIRDAFVVGRGADGDFAELMTADYSQIEMRIMAHLSKDEGLIEAFNTGEDLHS
FVASRAFSVPIDEVTAELRRRVKAMSYGLAYGLSAYGLSAQLKISTEEAKVQMEQYFDRF
GGVRDYLQSVVDQARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADI
IKVAMINVDQAIKDAGLTSRMLLQVHDELLFEVAPGERDALEKLVRERMGNAYPLDVPLE
VSVGFGRSWDAAAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcagccaccaccgccgcagacaagaagccgggttcggctcccggagccgagcag
aagccgacattgatgctgttggacggtaattcgctggcataccgggcgttttacgcgttg
ccggcggagaacttcaagaccaggggcgggctgaccaccaacgccgtctacggcttcacc
gcgatgctgatcaacctgctgcgcgacgaacagcccagccatatcgccgcggcgttcgac
gtgtccaggcagacgttccgcgtcgacaagtacccggagtacaaggcgggccggtcgtcc
acacccgacgagttccgcggccagatcgacatcaccaaggaggtgctgggcgcgctcggc
atcaccgtgctggccgaaccgggtttcgaggccgacgacatcatcgccaccctggccacc
caggccgaggacgccggctaccgcgtcctggtcgtcagcggcgaccgtgactcactgcag
ctggtcagcgacgacgtcacggtgctgtacccgcgcaagggcgtcagcgagctcacccgg
ttcacccccgaggccgtggtggagaagtacgggctcaccccgcggcagtaccccgacttc
gcggcgctgcgcggtgatcccagcgacaacctgccgggcatcccgggggtcggggagaag
acggccaccaaatggatcgccgaatacggttcactgcaggagctggtcgacaacgtcgat
gcggtgaagggcaaggtgggcgatgcgctgcgggcccacctgtccagcgtggtgctcaac
cgggaactgaccgatctggtcaaggacgtgccgttggcccagacccccgacacgctgcgc
atgcagccgtggaaccgcgaccagatccaccggttgttcgacgacctggagttccgggtg
ctgcgcgaccggctgttcgagacgctggcgtcggccgatcccgaggtcgaccagggcttc
gacatccgcggcggggcgctggagccgggcgagctggccggctggctggccgaacacagc
ctgggcaaccggttcggcctggccgtggtgggcacgcatcaggccttcgacggcgacgcc
accgcggtggcgatcgtcgccgccgacggcgagggccgctacctcgacaccgccacactg
atccccgaggacgaggcggcgctggcctcctggctcgccgacccgggctcgcccaaggcc
ctgcacgaagccaagctggcgatgcacgacctggaaggccgcggctggacgctcgcaggc
gtcacgtcggacaccgcgctggcggcctacctggtccggcccggacagcgcagcttcacc
ctcgacgacctctcgctgcggtacctgcgacgcgaactgcgcgcggaaaagcctgaacag
caacaactttcgctgctcgatgacagcgacggcgtggacgaccaggccgtgcagacgctg
atcctgcgggccagcgcggtgatggacctcgccgatgcgctcgacgaggagctcgcgcgc
atcgactcgctggcattgctgaacaacatggagctgcccgtgcagcgggtgctcgccgag
atggagaccgcaggcatcgccgtcgacctcgagcggctcggggagctgcagagcgagttc
gccgaccagatccgcgacgcggcggaggccgcgtacgcggtgatcggcaagcagatcaac
ctcggctcgcccaaacagctgcaggtggtgctgttcgacgagctggagatgccgaagacc
aaacgcaccaagaccggctacacgacggatgcggacgcgctgcaatcgctgttcgacaag
accggccatccgttcctgcagcacctgctggcgcaccgcgacgccacccggctcaaggtg
accgtcgacgggctgctgaactcggtggcctccgacggacgcatacacaccacgttcaac
cagaccatcgccgcgacgggccggttgtcctcgaccgagccgaacctgcagaacatcccg
atccgcaccgaggcggggcgacggatccgggacgcgttcgtggtcggcaggggagccgac
ggcgacttcgccgagctgatgaccgccgactacagccagatcgagatgcgcatcatggcg
cacctgtccaaagacgaagggctgatcgaggcgttcaataccggtgaggacctgcactcg
ttcgtggcgtcgcgggcgttctccgtgccgatcgacgaggtcaccgccgaactgcggcgc
cgcgtcaaggcgatgtcctacgggttggcctacgggttgtccgcatacggtctgtccgcg
cagctgaagatctccaccgaagaagccaaggtgcagatggagcagtacttcgaccggttc
ggcggggtgcgcgattatctgcagtccgtcgtggaccaggcgcgcaaggacggctacacg
tcgacggtgctgggccgccgccgttacctgcccgaactcgacagcagcaaccggcaggtc
cgcgaggccgccgaacgggccgcgctgaacgcaccgatccagggcagcgccgccgacatc
atcaaggtggcgatgatcaacgtcgaccaggcgatcaaggacgccgggttgacgtcgcgg
atgctgctgcaggtgcacgacgagttgctgttcgaggttgcgccgggcgagcgcgacgcc
ctggagaagctggtgcgcgagcggatgggcaacgcctacccgctcgatgtgccgctcgag
gtgtctgtcggcttcggccgcagttgggatgcggccgcgcactag
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