Mycolicibacterium holsaticum: K3U96_15430
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Entry
K3U96_15430 CDS
T07607
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mhol
Mycolicibacterium holsaticum
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhol03016
]
K3U96_15430
Enzymes [BR:
mhol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K3U96_15430
Transfer RNA biogenesis [BR:
mhol03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K3U96_15430
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QZA15329
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All DBs
Position
3196584..3197840
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AA seq
418 aa
AA seq
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MTEPQDTDSEQEPDATPLLAPREGVPELASSRSEIARAAELLDSGTGPFAVDAERASGFR
YSNRAYLVQIRRAGAGTVLIDPVNHGADPVATLAPVAEVLGTDEWVLHAADQDLPCLAEI
GMRPPALYDTELAGRLAGFDKVNLAAMVERLLHLHLTKGHGAADWSKRPLPPEWLNYAAL
DVEVLVDLRNAIAAVLDEQHKSDWAAEEFEHLRKYEASPTRRDRWRRTSGIHKVRDPRAL
AAVRELWITRDHIAQRRDIAPGRILPDSAIINAATTDPDTVEKLTALPIFGGSRQRRSAQ
VWLDALARARATSEPPDPHESSNGPPPASRWSRRKPEAAARLVAVRARLSELSQQLRVPS
ENLLTPEVVRRLCWDWQPPENPEDTAAVIDAFLRDAQARPWQRHLVVPALAEALTATP
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccgcaagacaccgactccgagcaggagcccgacgccacaccgctgctggcg
ccgcgtgagggtgtaccggagttggccagcagccgaagcgaaatcgcaagggcagcagag
cttttagattcgggcaccggaccgttcgcggtggacgccgagcgggcgtcgggctttcgt
tattccaaccgcgcctatctggtgcagatccgtcgcgccggggcgggaaccgtgctcatc
gacccggtcaaccacggcgccgacccggtggccaccctcgcgccggtcgccgaggtgctc
ggcaccgacgagtgggtgttgcacgccgcggatcaggacctgccgtgcctggccgagatc
ggcatgcggcccccagccctgtacgacacggagttggcggggcgcctggccgggttcgac
aaggtgaacctcgcggcgatggtagagcgcctgctgcacctgcatctgacgaaggggcac
ggcgcagccgactggtccaagcgcccgctgccgcccgagtggctcaactatgcggcgctg
gatgtcgaggtgctggtcgacctgcgaaacgccatcgccgcggtgctcgacgaacagcac
aaaagcgattgggcggcagaggaattcgagcacctacgcaaatacgaggcgtcacccacg
cggcgagaccggtggcggcgcacgtcgggcatccacaaggtgcgtgacccgcgcgcgctg
gccgccgtgcgcgagctgtggatcacccgcgaccacatcgcccagcgccgcgacatcgcg
cccgggcgcatcctgccggactcggcgatcatcaacgccgctaccaccgatcccgacacc
gtcgaaaagctcaccgccttaccgatattcggcgggtcgcggcagcgccgaagcgctcag
gtctggctggacgcgctggcccgcgcgcgcgccaccagcgagccaccggacccgcacgaa
tcgtcgaacggcccgccgccggcatcacggtggtctcgacgcaaacccgaggcggcggcc
cggttggtggcggtgcgcgcccggctgagcgaactgtcgcaacagttgagggtgccttcc
gagaacctgctcaccccggaggtggtgcgccggctgtgctgggactggcagccgcccgag
aacccggaggacaccgcggccgtcatcgacgcgttcctgcgcgacgcgcaggcgcggccc
tggcagcgccatctggtcgtccccgcgttggccgaggcgttgaccgccaccccttga
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