Mycolicibacterium holsaticum: K3U96_19615
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Entry
K3U96_19615 CDS
T07607
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mhol
Mycolicibacterium holsaticum
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhol03021
]
K3U96_19615
Transcription machinery [BR:
mhol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K3U96_19615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_24
MarR_2
HTH_Crp_2
HTH_3
Sigma70_ECF
MarR
HTH_37
HTH_IclR
DUF7343
HTH_31
KORA
Motif
Other DBs
NCBI-ProteinID:
QZA11401
LinkDB
All DBs
Position
complement(4077993..4078781)
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AA seq
262 aa
AA seq
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MTPPTSQGSSSRSNSEYADVADMFRELKAVPEGSPDFQRQRDRIVERCLPLADHIARRFD
GRGEPREDLVQVARVGLVNAVIRFDVEAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRR
LKELHLRLGAATAELSQRLGRAPTASELAAELDMDRDEVVEGLVAGSSYNTLSIDSGGSA
NDDAPAIADTLGDVDFGLDQIENREALRPLLAALPERERTVLVLRFFESLTQTQIAERVG
ISQMHVSRLLAKSLARLRDQLQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccaccgacgtcacagggttcgtcatcccgatcgaactctgagtacgcggatgtc
gccgacatgttccgcgagttgaaggccgtcccggaaggttcacccgatttccagcgccag
cgggatcggatcgtcgaacgctgcctgccgctggccgaccacatcgcccggcgcttcgac
ggacgcggtgaaccgcgcgaagacctcgtccaggtggcgcgggtcggattggtcaacgcg
gtgatccgcttcgacgtcgaggcgggttcggacttcgtgtcgttcgcggtgcccacgatc
atgggtgaggtgcgcagacacttccgggacaacagctggtcggtcaaggtgccccgccgg
ctcaaagaactgcacctgcgcctgggcgcggccaccgccgaactgtcacagcggctcggc
cgtgcgccgaccgcctcggagctggccgccgaactcgacatggaccgcgacgaggtcgtc
gagggcctggtggcgggcagctcctacaacacgctgtccatcgacagcggcgggagcgcc
aatgacgacgcacccgccatcgccgacacactcggtgacgtcgacttcgggctcgatcag
atcgagaaccgagaagccttgcggcccttgctcgccgcgttaccggagcgggaaaggacc
gtgctcgtgctgcggttcttcgagtcgctcacccagacccagatcgccgagcgggtcggc
atctcgcagatgcacgtctcgcggctgctggcgaaatcgctagcgcggcttagggatcag
ctgcagtag
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