Mycolicibacterium holsaticum: K3U96_19625
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Entry
K3U96_19625 CDS
T07607
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhol
Mycolicibacterium holsaticum
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhol03032
]
K3U96_19625
03400 DNA repair and recombination proteins [BR:
mhol03400
]
K3U96_19625
Enzymes [BR:
mhol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K3U96_19625
DNA replication proteins [BR:
mhol03032
]
Prokaryotic type
DNA Topoisomerases
K3U96_19625
DNA repair and recombination proteins [BR:
mhol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K3U96_19625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QZA15423
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All DBs
Position
4079547..4080563
Genome browser
AA seq
338 aa
AA seq
DB search
MRLRRSDVHGPGVRRVRRGRGFSYQRPDGSPVTDEATLQRIKELVIPPAWKRVWICPHPN
GHIQAVGTDAAGRRQYLYHQRWQEERSEEKFDRVLSMSAALPEMRRRIAADLRTRGLTRD
RVLALALHLLDLGYFRAGSEQYAEENNSFGIATLHREHITVQRAGVEFDYPAKSGVRRTL
HVDDPEVVKSVRALLRRPDRGERFLVCRNGSGWTDIHADDLNTRFKELVGDEYTVKDLRT
WHGTVLAAAAFVDADPPVNKTVIKRVEAAVMKEVADELGNTPAVARGSYVDPRVVKSYES
GRTIAPAARRAAMTRDAGERQAILDRSTARLIRKVAKG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcgtcgtagcgacgtgcacgggcccggcgtgcgtcgggtgcggcgcggacgc
gggttctcctatcagcgccccgacggttctccagtcaccgacgaggcgacactgcagcgc
atcaaggagctggtgatcccgcccgcgtggaagcgggtgtggatctgtccgcatcccaac
ggacacattcaggccgtgggaaccgacgccgccggacgacgtcagtacctgtaccaccag
cggtggcaggaagagcgcagcgaagagaagttcgaccgggtcctttcgatgtcggcggcc
ctgcccgagatgcggcggcggatcgcggcggatctacggacgcgcggattgacccgcgac
cgggtcctcgcgctggccctgcacctgctcgacctcgggtacttccgggcgggcagtgag
caatacgccgaggagaacaactcgttcggcatcgcgacgctgcaccgtgagcacatcacg
gtgcagcgcgcgggcgtggagttcgactacccggccaagagcggggtccgccgcaccttg
cacgtcgatgacccagaggtggtcaaatccgtgcgggcactgttacgccgacccgaccgt
ggcgagcggttcctggtgtgccgcaacggttcgggatggacggacatccacgccgacgat
ctcaacacccggttcaaggagctggtcggcgacgaatacaccgtcaaggatctgcgaacc
tggcacggcacggtgctggccgcagcggcgttcgtcgacgccgaccccccggtgaacaag
accgtgatcaaacgggtcgaagcagcggtgatgaaggaggtcgccgacgagctgggcaac
acacctgcggtggcgcgcggctcctacgtcgacccgcgtgtggtcaaaagttacgagtca
ggccgcacgatcgccccggcggcgcgccgagcggccatgaccagagacgccggtgagcgt
caggcgatcctcgaccgcagcacggcccggttgatccgcaaggtcgccaagggctag
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