Mycolicibacterium holsaticum: K3U96_20050
Help
Entry
K3U96_20050 CDS
T07607
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mhol
Mycolicibacterium holsaticum
Pathway
mhol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3U96_20050 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhol03400
]
K3U96_20050 (xth)
Enzymes [BR:
mhol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
K3U96_20050 (xth)
DNA repair and recombination proteins [BR:
mhol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
K3U96_20050 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QZA11481
LinkDB
All DBs
Position
complement(4162451..4163245)
Genome browser
AA seq
264 aa
AA seq
DB search
MIVSTVNVNGIRAAVRQRSPDNLGLLAWLAATRADVVCLQETRADDDQVAAALAPALADG
WHLASAEPHLKGRSGVAVLSRLPITAARPLECDEFSTHGRYLEVDVAGTTVASVYVQTGE
AETDRQLEKERFLTVLAKRMAELADRHAVVCGDWNIAHTENDIKNWKGNLKKSGFLPSER
QWLTELLDAGWVDVVRVLHPDMAGPYSWWSWRGRAFDNDAGWRIDYQLATPTLAARAVAA
RVERAAAYALRWSDHAPVTVEYRG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcagcaccgtcaacgtcaacgggatccgcgccgcggtgaggcaacgctcgccg
gacaacctcgggctgctggcctggctcgccgccacccgcgccgacgtggtctgcctgcag
gagacccgtgccgacgacgaccaggtggccgcggcgctggcgccggcgctggccgacggc
tggcacctggcgtcggccgaaccccacctcaagggccgcagcggcgtcgcggtgctctcc
cgcctgccgatcaccgcggcgcggccactggagtgtgacgagttctcaacgcacggacgc
tatctcgaggtcgacgtcgcaggaacgaccgtggccagcgtctacgtgcagaccggcgaa
gccgaaaccgaccgtcagctggaaaaggaacgcttcctcaccgtgctggccaaacggatg
gccgagctggccgaccgccacgcggtggtgtgcggggactggaacatcgcgcacaccgaa
aacgacatcaagaattggaagggcaacctcaagaagtcgggctttctgcccagcgagcgg
caatggctgaccgaactgctggacgccggctgggtcgacgtggtccgcgtgctgcacccc
gacatggccgggccgtactcgtggtggtcgtggcgcgggcgggcgttcgacaacgacgcc
ggctggcgcatcgactaccagctggcgacgccgacgttggccgcgcgggcggtggcggcg
cgggtggagcgcgccgcggcgtacgcgctgcggtggtccgaccacgcgccggtgaccgtc
gaataccgcggttag
DBGET
integrated database retrieval system
