Mycolicibacterium holsaticum: K3U96_26770
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Entry
K3U96_26770 CDS
T07607
Symbol
gyrA
Name
(GenBank) intein-containing DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mhol
Mycolicibacterium holsaticum
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhol03032
]
K3U96_26770 (gyrA)
03400 DNA repair and recombination proteins [BR:
mhol03400
]
K3U96_26770 (gyrA)
Enzymes [BR:
mhol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K3U96_26770 (gyrA)
DNA replication proteins [BR:
mhol03032
]
Prokaryotic type
DNA Topoisomerases
K3U96_26770 (gyrA)
DNA repair and recombination proteins [BR:
mhol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K3U96_26770 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
SIS
LAMB1
Motif
Other DBs
NCBI-ProteinID:
QZA12651
LinkDB
All DBs
Position
complement(5613229..5617002)
Genome browser
AA seq
1257 aa
AA seq
DB search
MTDTTLPPGDEAGDRIEPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAM
YDSGFRPDRSHAKSARSVAETMGNYHPHGDASIYDTLVRMAQPWSLRYPLVDGQGNFGSP
GNDPPAAMRYCVTGDALVRLPFGQSVRIADIVPGARPNSDNVVDVKVLDRHGNPVLADRL
FHSGEHQTYTVRTAEGYEVTGTANHPILCLVDVAGVPTLLWKLIEEVRGDDWVVIQRTPP
AEFGPPGDWHGTLEALLFGAFISEGFVSDKRAGFNNLDRDYFNMVVAAYDAVVGGPRYVS
ERKIASGSNLLELDVQNVDALRRSRLGELVGQRSADKAVPEWLWHSPAAVKRTFLGALFE
GDGSCSALPRNTVQVSYSTRSGRLAKDVQQMLLEFGVISRRYLHATGEHKVVITNRAHAE
LFSTQVGFGGSKQAKLQGLLAALPAKAAGLDSDHVPGLAQFIRAHCGSRWVDKDWLNRHN
IDRQSRWQRDRAEILGRIADTDVKAIASELTDGRFYYARVTSVTDAGVQPVYSLRVDTDD
HAFITSGFISHNTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANG
SGGIAVGMATNIPPHNLRELAEAVYWCLENFDADEEATLKAVCERVKGPDFPTSGMIVGS
QGISDAYTTGRGSIRMRGVVEIEEDSRGRTGLVITELPYQVNHDNFITSIAEQVRDGKLA
GIANIEDQSSDRVGLRIVIELKRDAVAKVVLNNLYKHTQLQTSFGANMLSIVDGVPRTLR
LDQMIRHYVDHQLDVIIRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIA
RQGLIELLDIDDIQAQAILDMQLRRLAALERQRIVDDLAKIEAEIADLEDILAKPERQRG
IVRDELKEIADKHGDDRRTRIVPADGEVSDEDLIAREDVVVTITETGYAKRTKTDLYRSQ
KRGGKGVQGAGLKQDDIVNHFFVCSTHDWILFFTTQGRVYRAKAYDLPETSRTARGQHVA
NLLAFQPEERIAQVIQIQTYEDAPYLVLATRKGLVKKSRLTDFDSNRSGGIVAVNLRDGD
ELVGAVLCSAEDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNADDALLSLNVV
RDDTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTIQYDKRRGTLVGALIVDDDTELYAI
TSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLVAIARNAEEGDSTDEVNTDPGA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccacgttgccgccgggcgacgaagcaggcgaccgcatcgaaccggtcgac
atccagcaggagatgcagcgcagctacatcgattacgcgatgagcgtgatcgtgggccgc
gcgctacccgaggtccgcgacggtctcaagccggtgcaccgccgggtgctctacgccatg
tacgactcgggcttccgccccgaccgcagccacgcgaaatccgcacgctccgttgccgag
acgatgggcaactaccacccgcacggcgacgcgtcgatctacgacaccctggtccggatg
gcccagccgtggtcactgcggtacccgctggtcgacgggcagggcaacttcggctcgccg
ggtaacgatccgccggccgcgatgaggtactgcgtcaccggtgatgccttggtgcgcctg
ccgtttggacagtcggttcggatcgcggacatcgttcctggcgcccggccgaactccgac
aacgtcgtcgacgtcaaggtattggatcgccacggcaaccccgtactggccgaccggctg
ttccactccggagagcatcagacctacaccgttcggactgccgaggggtacgaagtcacc
ggtaccgccaaccatccgatcctgtgcttggtggacgtggccggcgttccgactttgttg
tggaagctgatcgaagaagtgcgtggggacgactgggtggttatccaaagaaccccgcca
gcggagttcggcccaccgggtgactggcacggcacgttggaggcactcctcttcggtgcc
ttcatcagcgaggggttcgtctcggacaaacgtgccgggttcaacaacctagaccgggac
tacttcaacatggtggtggctgcctacgacgctgtggtgggcggcccgcgatatgtctcc
gagcgaaagattgcttccggttcgaatctgctcgaactcgatgtccaaaacgtggacgcc
cttcggcgcagccgtctcggtgaattggttggtcagcggtcggcggacaaggcagtcccc
gagtggctttggcacagccctgcggcagtcaaacgaaccttccttggcgccctgttcgag
ggtgatgggtcatgttcggcactgccgcgaaacacagttcaagtctcgtattcaacccga
agcgggcgcttagccaaggacgtccagcagatgctgctggagttcggtgtgatttcacgg
cgctatctgcacgcgacgggtgagcataaggtcgtcatcacgaaccgtgcacatgctgaa
ttgttctcgacccaggtcggtttcggcggatcgaagcaggccaagctacaggggctcctc
gcagcgctgccggccaaggcggcggggctggacagcgaccacgtcccgggcctcgcccag
tttattcgcgcgcactgcggcagccggtgggtagacaaggactggctaaacaggcacaac
atcgaccgacagtcgcggtggcagcgcgaccgcgcggagatcctcggccgcatcgcggac
accgatgtgaaagcgattgcctccgaactcactgacggccgcttctactacgcgcgtgtg
acttcggtgaccgacgcgggggtgcaacccgtctatagcctgcgggtcgatacggacgac
cacgcattcatcacgagcgggttcatcagccacaacaccgaagcgcggctgaccccgctg
gcgatggagatgctgcgcgaaatcgacgaagagacagtcgatttcatcccgaactacgac
ggccgggtgcaggaacccacggtgttgccgagccggttcccgaacctgctggccaacggt
tcgggcggtatcgcggtcggtatggccaccaacatcccgccacacaatctgcgcgagctc
gccgaggcggtgtactggtgcctggagaacttcgacgccgacgaggaggccacgctcaag
gccgtctgcgaacgcgtcaagggtcccgacttccccacctccgggatgatcgttggatca
caaggtatttcggatgcctacaccaccggtcgcggatcgatccggatgcgcggtgtcgtc
gagatcgaagaggacagccgcgggcgcaccgggctggtcatcaccgagctgccgtaccag
gtcaaccacgacaacttcatcacctcgatcgccgaacaggtccgtgacggcaagctggcc
ggcatcgccaacatcgaggaccagtccagcgaccgggtgggtctgcgcatcgtcatcgaa
ctcaaacgtgacgccgtggccaaggtggtgctgaacaacctctacaagcacacccagctg
caaaccagcttcggcgccaacatgctctcgatcgtcgacggggtcccgcgcacgctgcgg
ctggaccagatgatccggcactacgtcgaccatcaactcgatgtcatcatccggcgcacc
acctaccggctgcgtaaggccaacgaacgggcccacattctgcgcggtctggtcaaggcg
ctcgacgccctcgacgaggtgatcgcgttgatccgggcgtcggagaccgtcgacatcgcc
cggcagggcctgatcgagctgctcgacatcgacgacatccaggcccaggccatcctggac
atgcagctgcgtcggctggccgccctggaacgtcagcgcatcgtcgacgacctcgccaag
atcgaggccgagatcgccgacctggaagacatcctggccaagcccgagcggcagcgcggc
atcgtgcgcgacgagctcaaggagatcgccgacaagcacggcgacgaccgtcgtacccgc
atcgtgcccgccgacggtgaggtcagcgacgaggacctgatcgcgcgcgaggacgtcgtc
gtcacgatcaccgagaccggctacgccaagcgcaccaagaccgacctgtaccgcagccag
aaacgcggcggtaagggcgtgcagggcgccgggctcaaacaggacgacatcgtcaaccac
ttcttcgtctgctcgacacacgactggatcctgttcttcaccacgcagggccgggtgtac
cgggccaaggcgtacgacctgccggagacctcgcgcaccgcgcgcggccagcacgtagcc
aacctgctggcgttccagccggaggagcgcatcgcgcaggtgatccagatccagacttac
gaggacgccccgtacctggtgctggcgacccgtaagggcctggtgaagaagtcgcggctg
accgacttcgactcgaaccgctccggcggcatcgtggcggtcaacctgcgtgacggcgac
gaactggtcggtgccgtgctgtgctcggccgaggacgacctgctgctggtgtcggccaac
ggccagtcgatccggttctcggcgaccgacgaggcgctgcgcccgatgggccgggccacc
tcgggtgtgcagggcatgcgcttcaacgccgacgacgcgctgttatcgctgaacgtggtc
cgtgacgacacatatctgctggtcgccacgtccgggggttacgccaagcgcaccgcgatc
gaggagtacccggtgcagggccgcgggggcaaaggggtgctgacgatccagtacgacaaa
cgccgtggcactctagttggtgcgttgatcgtcgatgacgacacagagctgtacgccatc
acctccggtggaggcgtcatccggacggcggctcgccaggttcgcaaggccgggcggcaa
accaagggcgtccggttgatgaacctgggtgagggcgacacactggttgccatcgcgcgc
aacgccgaggaaggtgacagcaccgacgaggtcaataccgaccccggagcctga
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