Mycolicibacterium holsaticum: K3U96_26785
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Entry
K3U96_26785 CDS
T07607
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
mhol
Mycolicibacterium holsaticum
Pathway
mhol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K3U96_26785 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhol03400
]
K3U96_26785 (recF)
DNA repair and recombination proteins [BR:
mhol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K3U96_26785 (recF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
DUF2813
SbcC_Walker_B
ABC_tran
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QZA12654
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Position
complement(5619849..5621021)
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AA seq
390 aa
AA seq
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MHVRRLGLTDFRSWPRIDLELAPGRTVFVGPNGFGKTNIIEALWYSATLASHRVATDAPL
IRTGAQRAVVSTIVVNEGRELAVDLEITAGRANKARLNRSPVRAAREILGVLRAVLFAPE
DLALVRGDPGERRRYLDELATTRRPQIAAVRADYDKVLRQRTALLKTAAAARYRGDRSVL
DTLDVWDGHLAEKGARLIAARVDLVTQLAPEVEKAYQLLAPSSRPAAIRYRSGVDVVEEE
AAAGTGSAELFEAALLDAMSRRRDAELERGVCLVGPHRDDLELRLGDQVAKGFASHGESW
SMALSLRLAAYELLRAEGGDPVLLLDDVFAELDTARRQALANVAADAEQVLVTAAVAEDI
PADWDARRIEVAMRDGDDGRVSEVVEAPDE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgtccgtcgtctcggattgaccgacttccggtcatggccccggatcgacttggaa
ctcgccccggggcgcaccgtgttcgtcggcccgaacggcttcggtaagaccaacatcatt
gaggcgctgtggtattcggcgacgttggcgtcgcaccgggtggccacggatgctccgctg
atccgcaccggcgcgcagcgcgctgtggtgtcgaccatcgtggtcaacgagggccgtgag
ctggcggtggacctggagatcaccgcaggccgggccaacaaggcccggttgaaccgctcg
ccggtgcgcgcggcacgcgagatcctcggggtgctgcgcgcggtgttgttcgcgcccgag
gatttggcgctggtgcgcggggatcccggcgagcgtcgccgctacctcgacgaactcgcc
acgacgcggcgaccgcagatcgcggccgtgcgggcggactacgacaaagttcttcggcaa
cgcaccgcgctgctgaaaaccgccgcggccgcgcggtaccgaggcgaccgcagcgtgctg
gacaccctcgatgtatgggacgggcatctggccgagaagggcgcgcggctgatcgcggcc
cgggtcgacctggtgacccaactggcgcccgaggtcgagaaggcctatcaactgctggcc
ccgtcgtcgcgacccgcggcgatccgatatcgcagcggcgtggacgtcgtcgaggaagaa
gccgccgccgggacgggcagcgccgagctgttcgaggctgcgctactggatgcgatgtcg
cggcgccgcgacgccgaactcgagcgcggcgtgtgcctggtcggcccgcaccgcgacgat
ctggagttgcggctcggcgatcaggtcgccaaaggttttgccagccacggggaatcgtgg
tcgatggcgctgtcgttacggttggccgcctacgagttgttgcgcgccgagggcggcgat
ccggtgcttttgctcgatgacgtgttcgccgaactggacaccgcgcgccgtcaggcgctg
gccaacgtcgccgccgacgccgaacaggtgttggtcaccgcggccgtcgccgaggacatc
cccgccgattgggacgcgcgccgtattgaggtggcgatgcgtgacggtgacgacggtcgg
gtgtcggaggtggtggaggccccagatgagtga
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