Metamycoplasma hominis ATCC 27545: MLBD4_01575
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Entry
MLBD4_01575 CDS
T03410
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mhom
Metamycoplasma hominis ATCC 27545
Pathway
mhom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MLBD4_01575 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhom03021
]
MLBD4_01575 (rpoC)
03400 DNA repair and recombination proteins [BR:
mhom03400
]
MLBD4_01575 (rpoC)
Enzymes [BR:
mhom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MLBD4_01575 (rpoC)
Transcription machinery [BR:
mhom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MLBD4_01575 (rpoC)
DNA repair and recombination proteins [BR:
mhom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MLBD4_01575 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AIU34034
LinkDB
All DBs
Position
complement(341223..345629)
Genome browser
AA seq
1468 aa
AA seq
DB search
MKKISKYESLDEEKISKISLALATPQDVETWSHGEVTKPETINYKSYKPERGGLFDEIIF
GPMIDYRCPVCGFKYKKVNEGSYCTRTELCKQEHVQILPKIARRTHMGHIKLNSPVVHFW
YFKVDHSIIYKLLGLKSSNGSDVVKREELENLIYYKNHIVLEDGGLKSLPKNQIIEINEA
AIIYRNALEELLERFQEGTEEYDDIKETLDSLIEKATSKIGQEYGIDFYELNEVIEHYSD
AKIGTGALAIEYLLKNINLAEEKQKVTDEINRLNAEEINNPERFATTAKQTREKLYKRLQ
VINAFIESKQDPTSMLIYNLPVIPADLRPLIQLDGGRHSTSDINELYRRVIIRNNRLQQW
QEKDAPTLVIQNELRMIQEAVDALIDNQRRTPNPVLSKDNRPFKSISDALTGKKGRFRQN
LLGKRVDYSGRSVIAVGPSLKMHQCGIPREMAAKLFEPWIIERLIEKEVATTIKSAKKII
EDQNPVIWPHVAEAIKGRLVLLNRAPTLHRLSIQAFEPVLVRGKAIRLHPLVCTPFNADF
DGDQMAVHVPVSEQALLESRELMLANKNILGPKDGEPIINPSQDMVLGIYYLTIEEPGAK
GEGRVFDNYEHMLRALENKVVTLHTRIALPASEVKTPKLIFPFDGPQYIISTVGKFIFNN
IFPKTFPFIYDNKVAKANSLEDYNQTFNAKYVVQAGTNIPEYIKNMPIEEAFNKKNISKI
IRYVFDKYVAQISMSDIAEVINNLTESSDANDSIIQFLHVKNYENRKIDYEHAMLLAQFT
SQEKQKIEMLNPARANGQEVPLSPAEKAEILDTVWFRYTNIVASILDSIKQLGFDYSTYS
GISISFSDILETNKKQEYIAQGDEYIAKLKHYYEQGWITDDDRYSLTIKKWAEVKDLIQE
DLQKIIKENPQNPVITMINSGARGNISNYVQLAGMRGLMANNTKTTKADAKNDRVVRSTV
EVPVKSSFIEGLTAFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVREENCG
TDYGYKARNIVDTKTKQIIVPLKERIVGRFANKPVVTSAGIEICSRNELITEKIAQRIIA
SGIEEVEIRSILGCNTRNGVCKMCFGKDLATNRIVNIGEAVGIIAAQSIGEPGTQLTMRT
FHTGGVAGVEDITGGFTRLIELIDAHEQPWGRPAVISPYKGIVTKIEVDEKDNTNYLVTI
ESKGSSNTTVSHKIFVNTTKKLRVQEGDELRIGQKISEGPIILKELLALTDVITVQNYLL
KEIQRIYRIQGIAISDKYIEIIIRQMMSKLVISEPGDSKFFAGAIVDIFDYQEENAILLS
KGLKPAYGKVVIKGAKQVPLLSDSFLAAASYQETSKILVHAAISSRIDNLSGLKENIILG
KKIPSGTALFPFEEHSKYDIKPSINYFTTTPIDGTEISEPIDIDSVVNTAQEYDNDKQSV
EEDYSPNDEELVAEEETFDDEENQNDFE
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatttcaaaatacgaatcattagatgaagaaaaaatttcaaaaatttcatta
gcattagcaactcctcaagatgttgaaacttggtctcatggtgaagttactaagccagaa
actattaactataaatcatataagccagaacgtggtggattatttgatgaaataattttt
ggaccaatgattgattatcgttgccctgtatgtggtttcaaatacaaaaaagttaatgaa
ggaagctattgtacaagaactgaattatgtaaacaagaacatgttcaaatattgcctaaa
atagcacgtagaacccatatgggacatataaaactaaatagtccagttgttcacttttga
tacttcaaagttgatcactcaattatttataaattgcttggtttaaaatcttcaaatggt
tctgacgtggttaaacgtgaagaactagaaaatttaatttattacaaaaatcatattgtt
ttagaagatggtggcttaaaatcattacctaaaaatcaaattattgaaattaatgaagca
gcaattatttaccgcaatgctctagaagaattgcttgaaagatttcaagaaggtacagag
gaatatgatgatattaaagaaaccctagattctttaattgaaaaagcaacatcaaaaatc
ggtcaagaatatggaattgatttttatgaattaaacgaagtaattgaacattattcagac
gctaaaataggcactggtgctttagctattgaatatttattaaaaaacataaatttagct
gaagaaaagcaaaaagtaactgatgaaattaatcgtttaaatgcagaagaaattaataat
cctgaacgttttgccacaactgcaaaacaaacaagagaaaaactttataaacgtttgcaa
gtaattaatgcatttattgaatctaaacaagatccaactagcatgttaatttataatttg
cctgttattccagcagatttaagacctttaattcaattagatggtggtagacactcaact
agcgatattaatgaattgtatcgtagagtaattattagaaacaatagattgcaacaatga
caagaaaaagatgcccctacattggttattcaaaacgaactaagaatgattcaagaagca
gtagatgctttaattgataaccaaagaagaacacctaaccctgttttatcaaaagacaat
cgtccatttaaatcaatttcagatgcattaactggtaaaaaaggtcgttttagacaaaat
ttactaggaaaacgtgttgactattctggacgttcagttattgccgtagggccttcatta
aaaatgcaccaatgtggtataccaagagaaatggctgctaaattatttgaaccatgaata
attgaaaggctaattgaaaaagaagtagctacaacaattaaaagtgctaaaaaaattatt
gaagaccaaaacccagtaatttgacctcatgttgctgaagcgattaagggcagactagta
ttattaaaccgtgcacctacattacaccgtttatctattcaagcctttgaacctgtttta
gtaagaggcaaggctattagattacacccattagtatgtactccatttaatgctgacttc
gatggtgaccaaatggctgttcacgttcctgtttctgaacaagcattgcttgaaagtcgt
gaattaatgttggctaataaaaacattctaggacctaaagatggtgaacctattattaac
ccttctcaagatatggttttaggtatttattatctaactattgaagaaccaggagctaaa
ggtgaaggacgtgtttttgataactatgaacacatgcttagagcattagaaaataaagta
gttacattgcacactagaatagcattacctgcttcagaagttaaaactccaaaacttatt
ttcccatttgatggtcctcaatatataatttcaacagtaggtaaatttatttttaataat
atattccctaaaacatttccatttatttacgacaataaagttgccaaggcaaattcattg
gaagattataatcaaacattcaatgcaaaatatgtcgttcaagcaggtactaatattcct
gaatatatcaaaaatatgcctattgaagaagcatttaacaaaaagaatatttctaaaata
atacgttatgtttttgataaatatgttgctcaaatttcaatgtctgatattgcagaagtt
attaataatttaactgaatcaagtgatgctaatgattcaataattcaattcttgcatgtt
aaaaattatgaaaatagaaaaattgattatgaacatgcaatgttgctagctcaatttaca
agtcaagaaaagcaaaagattgaaatgttaaatcctgctagggcaaatggacaagaagtt
ccacttagtccagctgaaaaagcagaaattctagacactgtatgatttagatatacaaac
attgttgcttcaatattggatagtattaaacaattaggttttgactattcaacatattct
ggaatttctatttcgtttagtgatattctagaaactaataaaaagcaagaatatattgct
caaggtgatgaatatattgctaaattaaaacactattatgaacaaggttgaataactgat
gatgatcgttactctttaactattaaaaaatgagcagaagttaaggatttaattcaagaa
gacctacaaaaaataattaaagaaaatcctcaaaacccagttattaccatgattaactca
ggtgctcgtggtaacatttctaactatgttcaattagcaggtatgcgtggattaatggct
aacaatactaaaactactaaggccgatgctaaaaacgaccgtgttgttagatcaacagtt
gaagttcctgttaagtcttcatttattgaaggacttactgcatttgaattctattcatca
actcacggtgctagaaaaggtttaaccgatactgctttgaacactgcaaaatctggttat
ttaacaagacgtttagttgatgttgctcaaaatattgttgttagagaagaaaactgtggt
actgactatggttataaagcaagaaacatagttgatacaaaaactaaacaaattattgtt
cctttgaaagaaagaattgttggaagatttgcaaacaaacctgttgttacaagtgcgggt
atagaaatttgttctagaaatgaattaattactgaaaaaattgctcaacgaataatagca
agtggtattgaagaagtcgaaattagatcaatcttaggctgcaatacacgtaacggtgta
tgtaagatgtgttttggtaaagaccttgcaacaaatagaattgttaatatcggtgaagca
gtaggtattattgcagctcaatctattggggaaccaggaactcaattaactatgcgtaca
ttccacactggtggtgttgctggggttgaagatattactggtggtttcactagattgatt
gaattaattgatgcccacgaacaaccatgaggacgtcctgctgttatttcaccatataaa
ggtattgttacaaagattgaagttgatgaaaaagacaatacaaactatttagtaacaatt
gaaagcaaaggatcttcaaacacaacagtttctcacaaaatttttgttaacacaaccaaa
aaattacgtgttcaagaaggcgatgaattaagaattggtcaaaagatttctgaaggacca
attatcttaaaagaattattagctttaacagacgtaattactgttcaaaattatttatta
aaagaaattcaaagaatttatcgtattcaaggtattgcaattagcgacaagtatattgaa
attataattcgtcaaatgatgtctaaattagtaatttctgaacccggagattctaaattc
ttcgctggtgctattgtagatatttttgactatcaagaagaaaatgctattctactttca
aaaggtttgaagccagcatatggtaaagttgttattaaaggtgcaaaacaagttccattg
ttgtctgattcattccttgctgccgcttcttatcaagaaacaagcaagatattagttcac
gctgctatttcatcaagaattgacaatttatctggcttaaaagaaaatattattcttggt
aaaaagattccatcaggaacagcattattcccatttgaagaacattcaaaatatgatata
aaaccatcaattaattactttacaacaactcctattgacggcacagaaatttctgaacct
attgatattgattcagttgttaatacagcgcaagaatatgacaatgataaacaatcagtt
gaagaagattattctccaaacgacgaagaacttgttgctgaagaagaaacatttgatgat
gaagaaaatcaaaacgattttgaataa
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integrated database retrieval system
