Methanosarcina horonobensis: MSHOH_0358
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Entry
MSHOH_0358 CDS
T03933
Name
(GenBank) Iron-dependent repressor IdeR/DtxR
KO
K03709
DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
Organism
mhor
Methanosarcina horonobensis
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mhor03000
]
MSHOH_0358
Transcription factors [BR:
mhor03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSHOH_0358
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fe_dep_repr_C
Fe_dep_repress
FeoA
MarR
HTH_24
HTH_11
TrmB
WHD_RNase_R
HTH_5
PH0730-like_N
HTH_IclR
HTH_27
Rrf2
WHD_HrcA
MarR_2
wHTH-PRTase_assc
HTH_6
LexA_DNA_bind
HTH_PafC
GntR
HTH_Crp_2
DUF2250
HTH_micro
HVO_A0261_N
HTH_45
DnaD_N
HTH_AsnC-type
Staph_reg_Sar_Rot
DUF7123
FaeA
DUF4423
TFIIE_alpha
HTH_10
AAA_assoc_C
HTH_1
DtxR
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AKB76841
UniProt:
A0A0E3S8A8
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All DBs
Position
445087..445761
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AA seq
224 aa
AA seq
DB search
MVLMHTDRLEEYLETILYLITKNRSPAKTKQIAEELNVSSPSVTEMIKKLHSMGFVEYKP
YQGVELTEKGTEEAVRIKRKHQVLETFLADVLDFDRKEAHREACELEHAVSDSVLERLYD
FLGNPEYCPDGHPINIDKSNLQREEGFIPLDEMREGSSGTIVRVTLPRETKERLTSLGII
TGEDIEVRRKQKQGCISVMAVGSEIALGRDIAKKIFITPKGKSL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggtgttaatgcatacagatcgacttgaagagtatcttgaaactattctttaccttatt
acaaaaaaccggagccctgcaaaaaccaaacaaattgcagaagaacttaatgtatcttca
cccagtgtgacggaaatgataaaaaagttgcattcgatggggtttgtcgaatataagccc
tatcaaggggttgaattgactgaaaaagggactgaagaagccgtccggatcaaaaggaaa
caccaggtgcttgaaactttcctggctgatgtccttgattttgacagaaaggaagctcac
agggaagcctgcgagcttgagcatgcggtatcggactcggtgcttgagagactttacgat
ttccttggaaaccctgagtactgccctgacgggcacccgataaatatcgataaaagcaat
ttgcagcgagaagaaggattcatccccctcgatgagatgagagagggaagttcaggcacg
attgtcagggtaacccttccaagagaaacaaaagagcgtttaacctctcttggcatcata
accggagaggatattgaagtcagacgcaagcagaaacagggctgtatttcggtgatggct
gtcgggtctgaaattgctcttggaagagatatagcaaaaaaaattttcatcactcctaaa
ggcaaaagcctgtaa
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