Methanosarcina horonobensis: MSHOH_0957
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Entry
MSHOH_0957 CDS
T03933
Name
(GenBank) Uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mhor
Methanosarcina horonobensis
Pathway
mhor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSHOH_0957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhor03400
]
MSHOH_0957
Enzymes [BR:
mhor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MSHOH_0957
DNA repair and recombination proteins [BR:
mhor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSHOH_0957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKB77440
UniProt:
A0A0E3WU66
LinkDB
All DBs
Position
complement(1118045..1118638)
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AA seq
197 aa
AA seq
DB search
MAAEEEDCGNLEERVRKMVDAGYETVAREAVACIRCPLHKSAIKRVIGKGSCNPKVFFIG
EAPGDAENKSGIPFYGRAGKQLDKMVEYMRLSEEDWFVTNTVKCHPPENRKPKVHEIECC
KPFLTAQIALLNPKLIILLGNTAERSYCPKRKLEWGVPVELDGRIVLKLYHPAALIYTAS
KIEVQRAFIDKNRELWQ
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaggaagaggattgcggaaaccttgaagaaagagttcgaaaaatggtggat
gccgggtacgagaccgtcgcaagagaggcggtagcctgcatacgatgccccctccataag
agtgcgataaaaagagtgataggaaaagggtcctgtaacccaaaagtgttttttatagga
gaagctccgggagacgccgaaaataaatccggaatccccttctatgggagagcagggaaa
cagctggacaaaatggtagagtatatgaggctttcagaagaagactggtttgtaacgaat
actgtcaaatgtcatcccccagaaaacagaaagccgaaggtgcacgagatcgaatgctgc
aaacccttccttactgcccagatagctctgcttaatcctaaactcataattctccttggc
aatacagctgaaagatcgtactgcccaaaaagaaaacttgaatggggagttccggttgaa
ctggatgggagaatagtcctgaaactctaccacccggcagcgctgatatatacagcttca
aaaatagaagtccagagagcttttattgataaaaatagagaactctggcagtaa
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