Methanosarcina horonobensis: MSHOH_1031
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Entry
MSHOH_1031 CDS
T03933
Name
(GenBank) DNA-directed RNA polymerase subunit B'
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mhor
Methanosarcina horonobensis
Pathway
mhor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSHOH_1031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhor03021
]
MSHOH_1031
Enzymes [BR:
mhor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSHOH_1031
Transcription machinery [BR:
mhor03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSHOH_1031
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DmmA-like_C
RNA_pol_Rpb2_45
DUF1451
Motif
Other DBs
NCBI-ProteinID:
AKB77514
UniProt:
A0A0E3S7X5
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All DBs
Position
complement(1205890..1207704)
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AA seq
604 aa
AA seq
DB search
MTKAKVFINGELVGTHDNPAELVEELRKMRRQGFISKQVNIALNDSTREVIINSDMGRAR
RPLLVVENGAPRVTQEQVQKLKNKEISFEDLVKEGCVEYLDAEEEENAFIALYESDITDS
HTHMELDPELMLGICTGMVPYPEHNASPRNTMGAAMIKQCIGVSTANQKLRPDTRAHVLH
YPQRALTRTRTSEAIGFDDRPAGQNFVVAILSYEGYNIEDALIFNKGSIERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEYRGARSADAYANLDIDGLVNPETPVGPNDVLIGKTSP
PRFLEEPSDFGIAVEQRRESSVTMRSNETGIVDTVILTESINGTRLAKVKVRDERIPDIG
DKFASRHGQKGVIGLKVPIADMPFTESGLTPDLMINPHAIPSRMTVGHVLEMIGGKVGSM
EGRRVNATAFSGENEDDLREALKKHGFAHTGKEIFYDGATGRMIPADVFVGVILYQKLHH
MVTSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLVGHGAAMSLKERLLDESDK
VVELVCSHCGMIATYDKQRNVAFCSACGADTDIYPVEMSYAFKLLLDEIKSLGVAPRLNL
EDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcaaaagtattcataaacggagagctcgtcgggactcatgacaaccctgcg
gaactcgtagaagagctcagaaaaatgaggcgacagggattcatctccaagcaggtgaac
attgctcttaatgacagcaccagggaagtaatcataaactctgatatgggcagggcaaga
aggcctcttttagttgtggaaaatggtgctcccagagtaactcaagagcaggtacagaaa
ctgaagaataaagaaatcagttttgaagacctggtaaaagaaggctgtgtagagtatctg
gatgctgaagaagaagaaaatgcattcattgctctctatgagtctgatattactgacagc
catacccatatggaactcgaccctgagcttatgctcgggatctgtaccggaatggtccct
tacccggaacataatgcatctccgcgtaacaccatgggtgcagccatgattaagcagtgt
atcggggtttctacagcaaaccagaagttaagacccgatacccgtgctcatgtccttcac
taccctcagagggcacttacgagaacaaggacttccgaagcaataggtttcgatgacagg
cctgcaggccagaacttcgtggttgcaatcctgtcatatgaaggatataatattgaagac
gctctgattttcaataagggttcaatcgaaagagggctcgggagaagccacttcctcagg
acttttgaaggtgaagaaagaaggtatcctggtgggcaggaagacaagttcgagatccct
gactccgaataccgtggagcccgcagcgctgacgcgtatgcaaaccttgacatagacgga
cttgtaaaccctgagacccctgtaggccccaacgatgtgcttataggaaagacaagtcct
ccgagattccttgaagagccttcagacttcggaattgcagttgaacagaggagagaaagc
tctgttaccatgcgttccaacgaaacaggaattgtggacaccgtcatccttacggaatcc
attaacggaacccgccttgcaaaggtaaaggtaagggacgaaaggatcccggacatagga
gacaagttcgcttccaggcacgggcaaaaaggagttatcggcttaaaagtccctattgct
gacatgccgtttacagaatcaggcctgactccggacctgatgattaacccgcacgcaatt
ccttcacgtatgactgtgggccacgtcctggaaatgattggcggaaaagttggctccatg
gaaggtagaagagttaatgcaaccgccttctcaggagaaaacgaagacgacctcagagaa
gccctgaaaaaacacggctttgcccacacaggaaaagagattttctatgatggagcaaca
ggcaggatgatccctgcagatgtcttcgttggcgtaatcctttaccagaaattgcaccac
atggttacttccaagatgcacgcaaggtcccgcggacctgtacaggttcttacccgccag
cctactgaaggtagagcaagggaaggaggtctcaggttcggagaaatggagcgtgacgtg
ctggtagggcacggagctgccatgtctttaaaagaaagattgctggacgagtctgacaaa
gtggtggaacttgtctgctcgcactgtggaatgattgcaacatacgacaagcagcggaac
gtagctttctgttcagcctgcggtgctgacactgacatatatccggtagagatgagctat
gcgttcaagctgttactggacgagattaagtcccttggagttgctcccaggcttaacctt
gaagatgctgtataa
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