KEGG   Methanosarcina horonobensis: MSHOH_1256
Entry
MSHOH_1256        CDS       T03933                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
mhor  Methanosarcina horonobensis
Pathway
mhor03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mhor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSHOH_1256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mhor03032]
    MSHOH_1256
DNA replication proteins [BR:mhor03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MSHOH_1256
SSDB
Motif
Pfam: AAA RCF1-5-like_lid RuvB_N Rad17 AAA_lid_RFC1 AAA_22 AAA_assoc_2 AAA_14 AAA_16 nSTAND3 IPT AAA_24 DNAX_ATPase_lid AAA_6 AAA_30 DUF815 AAA_7 NACHT TsaE IstB_IS21 AAA_33 AAA_25 Bcl-2_BAD nSTAND_NTPase5
Other DBs
NCBI-ProteinID: AKB77739
UniProt: A0A0E3S8F5
LinkDB
Position
1485358..1487136
AA seq 592 aa
MSAIEWAEKYRPRTLGDVVGNKKAVQDLRKWAEEWQSGIPEKRAVILYGPAGIGKTSSAH
ALAGDMDWEVIELNASDQRTAGVIEKIAGSAASMNTLFGGKRLIVLDEADNLHGTADRGG
MRAIAGIIKATLQPIVLIANDIYGLTPTVRNICLEIKFGSVQSRSMVPALKKVCDAEGIS
CSQEAILQIAENAGGDFRSAMNDLQAAASGKEALEVEDLSTAGRDVKENIFKAMQKIFKS
TDCKRALESAYGLDESPEDLVHWIDENLPIQYARKDGDLEDIRAGFGYLSKADLYLGRVK
KRQNYRMWRYASMLMVCGAALSKTRPYPGFIKYQQPSLWRRLGQTRSKRDMRDNIASKIG
EHSFESMHYSRNNLLGFYALMLKDEASAIEVTASLGLELEELMYLSGSAKASKKLQKIYD
EAQKLLEKKGDKAEEQAFFKVPAPLVDEKQTTLHCPVNIPEKEQEVPSEKSETSDSQPPE
GKQKTLNLGFDISPEPPEKEEASEKKLSEDPVPEEDNFFPLPKSMQEKKLISEPVEKKTL
STTSKKKGSDGSIDPSKQRTSDKASPSAGMQDNTGEVLKKAEPKNQKTLFDF
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgtcggcaattgaatgggctgaaaaataccgaccccggactcttggagatgtcgtgggg
aacaagaaagcagtgcaggacttgaggaagtgggctgaagaatggcagtccgggattcct
gagaaaagagctgtgattctctatggacctgcggggatagggaagacttcaagtgctcac
gcactggcaggggacatggactgggaggttatagagctcaatgcaagcgaccagaggact
gcaggcgttattgagaaaattgccggctctgcagcgtcaatgaatactctttttggaggt
aaacggcttattgtccttgatgaggctgataacctccacgggactgcagataggggtggg
atgagggctattgccgggatcataaaagccacacttcagccgatagtacttattgcaaac
gatatttacgggctgacacccacagtccggaacatttgtctggaaataaagttcgggtcc
gtacagagccgttccatggttcctgctttgaagaaggtctgtgatgctgagggaatctcc
tgcagccaggaagctattctgcagattgcagaaaatgcaggaggagatttcaggagtgca
atgaatgacctccaggctgcagctagtgggaaggaagcgctcgaagttgaggacctcagc
actgcaggcagagatgtcaaagagaatatctttaaggcgatgcagaagatctttaaaagc
actgactgtaaaagggctcttgaatctgcatacgggcttgatgaaagccctgaggatctc
gtgcactggatagacgaaaacctgccaattcagtatgctcggaaggatggcgacctcgaa
gatataagagcgggttttggatatctttcaaaggctgatctttatcttgggcgtgtgaaa
aagcgccagaactacaggatgtggaggtatgccagcatgcttatggtttgcggggctgcc
ctttcaaagacaagaccgtatcccggcttcatcaagtatcagcagccttcactctggaga
aggcttggacagacacgttcgaagcgggacatgcgagacaatatagcttcaaagataggg
gagcacagctttgaatcaatgcattactccaggaataaccttttaggtttttatgcgttg
atgttaaaggatgaagcatctgctattgaagtaactgcaagtctcgggcttgagcttgaa
gagctgatgtatctttcaggaagcgcaaaagcaagcaaaaagctgcagaaaatttacgat
gaagcgcagaagcttctcgagaagaagggcgataaagccgaagaacaggccttttttaag
gtacctgctcccttggtagacgaaaagcagacaactcttcactgccctgttaatattcct
gaaaaagaacaggaagttccctctgaaaaatccgaaacttctgattctcaacctccggaa
ggtaagcagaaaacccttaacctgggatttgatatctcgcccgagcctccagagaaagaa
gaggcttcagaaaagaaactatccgaggacccggtacctgaagaagataacttctttcct
cttcccaaatccatgcaagaaaagaaactcatttccgaacctgtagagaagaaaaccctt
tccacaacttcaaaaaagaagggttcggatggcagcatcgatccttcaaaacaaaggaca
tctgataaggcttcaccttccgcaggtatgcaggataacacaggagaagttttgaaaaaa
gctgagcctaaaaaccagaaaacacttttcgacttttaa

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