Methanosarcina horonobensis: MSHOH_1437
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Entry
MSHOH_1437 CDS
T03933
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mhor
Methanosarcina horonobensis
Pathway
mhor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSHOH_1437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhor03400
]
MSHOH_1437
Enzymes [BR:
mhor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MSHOH_1437
DNA repair and recombination proteins [BR:
mhor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSHOH_1437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AKB77920
UniProt:
A0A0E3WTI4
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All DBs
Position
complement(1732523..1733299)
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AA seq
258 aa
AA seq
DB search
MPEKYNLISWNVNGLRAAVKKGFLDLLLEHRFDVVCIQETKASQDKLPREVKNIPGYYNY
FVSAEQNGYSGVGTFSKKKPLNIEKGMGSEIFDREGRFLRTDYEDFVLMNIYFPNGKASQ
ERLDYKMAFYDAFLDYANALNAEGKKLVICGDVNTAHKEIDLARPKQNETISGFLPEERE
WMDKFLAAGYLDTFRMFNNESGNYSWWSMRTQARERNVGWRLDYFFVSENLREYVNSALI
YPEITGSDHCPVGLELEF
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaaaatacaaccttatttcctggaacgtaaacggtctcagggctgccgtcaaa
aaaggcttcctggaccttttactcgagcatagatttgatgttgtatgcattcaggagaca
aaagcctctcaggataagctccctcgtgaagtcaagaatattccaggctactacaattat
tttgtttccgcagagcagaacggttacagcggggtcggaacattttcaaagaaaaaaccc
ctgaatattgaaaagggcatgggtagcgagatatttgacagggaaggccgcttcttaaga
accgattacgaagacttcgtccttatgaacatctacttccctaacggcaaagcctcccag
gaacgcctggactacaaaatggcattttatgatgcctttttagattacgcaaacgccctc
aacgccgaaggcaaaaaacttgttatctgcggggatgttaacactgcccataaagaaatc
gaccttgctcgcccaaagcaaaacgaaacgatatccggttttcttcccgaagagcgggaa
tggatggataagttccttgcagccggataccttgatactttccgcatgttcaataacgaa
agtggaaattattcatggtggtcaatgaggactcaggctcgcgaaagaaatgttggctgg
cggcttgactatttctttgtcagtgaaaatctcagggaatatgtaaattccgcccttatt
tatcctgagattacaggttctgaccactgcccggtgggactggagcttgaattttaa
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