Methanosarcina horonobensis: MSHOH_2399
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Entry
MSHOH_2399 CDS
T03933
Name
(GenBank) Transcriptional regulator, TrmB family
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
mhor
Methanosarcina horonobensis
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mhor03000
]
MSHOH_2399
Transcription factors [BR:
mhor03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSHOH_2399
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
GntR
Pox_F11
Penicillinase_R
Motif
Other DBs
NCBI-ProteinID:
AKB78882
UniProt:
A0A0E3SF56
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Position
complement(2919102..2919866)
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AA seq
254 aa
AA seq
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MLLDEKMLVTLQKLGLTYYGARVYVTLVSLGPSDATELAAESEVPRTKIYDVLKRLKTEK
WITVEHTRPITYTPKYPRDILEEKKAAFNSEVDDVSNQLSMLYDKLMDKEIPKVWLLRGM
DNITAKTLDMIRRAERDIMLLGALYSANEIERLKTELSYAKKKGLNVRAISRQSIKLKEG
ELEIIKTLSSVIPETKISGPSFSKFVIIDDKELLMMFSKVEDEVLDIDNTIAIWIPNVSI
ASYQASIFNGIWNE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgatgaaaaaatgttagtgacattacaaaagttagggttaacatattacggg
gcaagggtttatgtaacgcttgtttcgctgggtccgagcgatgcaaccgagcttgctgct
gaatcggaagtccctcgtacgaagatatatgatgtcctgaaaaggcttaaaaccgagaaa
tggataacagtcgaacatacaagacctattacttatactcctaaataccccagagatata
ctcgaagagaaaaaagccgcttttaattctgaggttgacgatgtatcaaaccaattgtcc
atgctgtacgataaattaatggataaagaaattcctaaagtttggcttttaagaggaatg
gataatatcacggcaaaaacacttgatatgataagaagagctgaaagagacataatgctt
ttaggagccctttactctgcaaatgaaattgaacggctcaaaacggaattatcatatgct
aagaaaaaagggctaaacgtacgtgccatatccagacagagtataaaattaaaagaaggt
gaactggaaataattaaaacattgtcttcagttatacccgaaactaaaatatccgggcca
tcattttcaaaatttgtaataatagatgacaaagaactgttgatgatgttctcaaaagta
gaagacgaagttctggacatagacaatacaatagctatatggatcccaaatgtgtcgatt
gcgtcttaccaggcaagcatatttaacggcatatggaacgaataa
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