Methanosarcina horonobensis: MSHOH_2487
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Entry
MSHOH_2487 CDS
T03933
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mhor
Methanosarcina horonobensis
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhor03016
]
MSHOH_2487
Enzymes [BR:
mhor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MSHOH_2487
Transfer RNA biogenesis [BR:
mhor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSHOH_2487
Prokaryotic type
MSHOH_2487
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
Tautomerase_3
Motif
Other DBs
NCBI-ProteinID:
AKB78970
UniProt:
A0A0E3WU93
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Position
3029052..3030368
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AA seq
438 aa
AA seq
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MEVPEIEKQIGINLYSTDTEGLGGQLRQEIEDFIVKEITNREEGQEGKYLIIELTKRDWD
THHLTRTLAKILQISQKRISVAGTKDKRALTTQKISIFDTDESDIEKIHLKDIEIKVLGR
SRKSVELGDLWGNDFIITVRDIENSPEETEALLKKITDEILAQGGVPNFFGIQRFGSVRP
VTHLVGKAIVEGDFEKAALLYIAESFPEEPEETKKARQFVKETRDFKEGLKTYPLRLGHE
RAMMNHLIANPEDYSGSFRVLPQNLYRMFVHGYQSYIYNMILCRRIEAGIPLNRAVEGDI
VCFRNEAGLPDSSKTEKVTSETVNAMNRLIKRGRAFITAPLPGYVTEFASGRPGEIENEV
LKELGVSLEGFNVEEFPEMSSKGTRREVLLQVEPKFEVAEDELNPGKSKAVLEFMLPKGS
YATTVLREYMKVDPLQMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaagttccggaaattgaaaaacagataggaataaatctttactctactgatactgag
gggcttggagggcagctccgccaggaaatagaggatttcattgtaaaagaaattacaaac
cgtgaggaaggacaggaaggaaaatatctaattatcgaacttacaaaaagggactgggat
actcatcacctgacccgaactctcgcgaaaattctgcagataagccagaagagaatcagc
gttgcgggcacaaaggataaaagggcacttactactcagaaaatcagtatatttgatacc
gatgaatcagatattgaaaaaatccacttaaaagacatagaaataaaagtgctgggccgt
tcccgaaagtccgtagaacttggagacctgtggggaaatgatttcattattacagtcagg
gacattgagaattctcccgaagagacagaagctttgctcaaaaagataactgacgaaatt
cttgcccagggtggcgttcccaatttcttcgggatccagcgtttcggatctgtccgtcct
gttactcacttggtagggaaagccattgttgaaggagactttgaaaaagcagccctcctc
tatattgccgaatccttcccggaagaacccgaggaaacaaaaaaagcccgccagtttgtc
aaagagacaagggacttcaaggaaggcctgaaaacctacccccttcgccttggccacgaa
agggcaatgatgaatcacctgatagcaaatccggaagattattccggatctttccgcgtg
cttccccagaatctctacaggatgttcgtgcatgggtaccagtcctatatttataacatg
attctctgccgcaggatagaagccggtatacctctgaaccgggcagttgaaggcgatata
gtctgtttcagaaacgaagccggccttccggactcctcaaagaccgagaaagttacctct
gaaacagtaaatgccatgaaccgcctgataaagcgtggcagagccttcataaccgctcct
cttcctggttatgttacagaatttgcttccggaagacctggagaaatagaaaatgaagtc
cttaaagaacttggagtttctctcgagggtttcaatgtggaagagtttcctgaaatgagc
tcgaaaggcaccagaagggaagttctccttcaggttgaaccgaagtttgaggttgctgaa
gatgagctgaaccccgggaaatcaaaagcagttcttgagttcatgcttcctaaaggaagt
tatgctacaactgtactgcgggaatacatgaaagtcgatcctctgcagatgagttaa
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