Methanosarcina horonobensis: MSHOH_2688
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Entry
MSHOH_2688 CDS
T03933
Name
(GenBank) Shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
mhor
Methanosarcina horonobensis
Pathway
mhor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MSHOH_2688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mhor03009
]
MSHOH_2688
Ribosome biogenesis [BR:
mhor03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MSHOH_2688
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GFIT
Motif
Pfam:
SBDS_N
SBDS_C
SBDS_domain_II
EFG_C
Motif
Other DBs
NCBI-ProteinID:
AKB79171
UniProt:
A0A0E3SE58
LinkDB
All DBs
Position
complement(3286894..3287586)
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AA seq
230 aa
AA seq
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MVSLDEAVTARLKRGSKHFEVLVEPEGALAYKRGEEVNLENILAVETIFEDANRGDRAAE
SDILNSFETTDPFEIAAVILKSGELQLTAEQRKRMLEEKKKKVIYTISRNAINPQTRAPH
PPARIERAMEEAKVHIDPLKSVDQLVAITMKAIRPLIPIRFEEINIAVKIPPEYAPKAYG
DISKAGTITKEEWQRDGSWIAVVRIPAGVQTDFYALINHLTKGEAQTKLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctggacgaggcagtgactgcccggctcaaaagaggcagcaaacatttcgaa
gtcctggtagaacccgaaggggctctggcctataagcgaggtgaagaagtaaacctcgaa
aacattctggcagttgaaactatcttcgaagatgcaaacagaggggaccgggcagcggag
tccgatattctcaactcttttgagacaaccgacccctttgagattgctgccgtgatcctg
aaaagcggagagcttcagcttaccgctgagcagagaaaacgaatgcttgaagagaaaaag
aaaaaggttatctataccatttccagaaatgctataaaccctcagactagagcaccacac
cctcccgcaaggatagaaagagcaatggaagaggcaaaggtgcacatagaccctttaaaa
agcgtggatcagctggtagccattacaatgaaagccattcgcccgcttatccctatacgc
tttgaagaaattaatattgctgtaaaaatccctcccgagtatgcccccaaagcatatgga
gatatttccaaagccggaaccattacgaaggaagaatggcagcgtgacggctcatggatt
gcagtggtaaggattcctgcaggagtccagactgatttttacgctcttataaatcatctc
acaaagggagaggctcagactaaacttttataa
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