Methanosarcina horonobensis: MSHOH_2880
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Entry
MSHOH_2880 CDS
T03933
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mhor
Methanosarcina horonobensis
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhor03032
]
MSHOH_2880
03400 DNA repair and recombination proteins [BR:
mhor03400
]
MSHOH_2880
Enzymes [BR:
mhor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MSHOH_2880
DNA replication proteins [BR:
mhor03032
]
Prokaryotic type
DNA Topoisomerases
MSHOH_2880
DNA repair and recombination proteins [BR:
mhor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSHOH_2880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AKB79363
UniProt:
A0A0E3SHQ6
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All DBs
Position
complement(3520778..3523621)
Genome browser
AA seq
947 aa
AA seq
DB search
MAEYEDKNKSEAEMKKSYQATLIPEDPSEDTAEEPETEELSGFTSGEPDEPQTDKESSFE
EEIGIDTDFEDPGDEEPVRAGVTPILIDDEMKRSYINYAMSVIVGRALPDARDGLKPVHR
RILFSMNESGITHDKPYKKSARIVGDVLGKYHPHGDSAVYDSIVRMVQDFSLRYPLIDGQ
GNFGSIDGDSAAAMRYTEVRMDRIAKEMLVDIDKETVPFRPNYDGSLEEPEVLPAKLPNL
LINGSTGIAVGMATNMAPHNISEVIDGTLMLIDNPETQVSELMSVIKGPDFPTGAHILGT
SGIRSAYMTGRGPVKIRAVAEIQELKKDRQQIIVTELPYQVNKARLIENIAQLAREKVIN
GISDLRDESDREGIRVVIELSKGINPKVVLNQLYKHTQMETTFGIINLALVDGKPKELNL
KQLLEIYLEYRMEIIQKRTLYDLRKSEERAHILEGLKIALDNIDAVVALIKSSANGDEAK
QGLMDNFALDEVQAKAILDMRLQRLTGLETQKILEELEALIKLIAELRKILASDELKYEI
IRTELIELKEKYGDTRRTKIVHHTEDVTDEDLIPEQDVVVTITNSGYIKRIPLATYTMQR
RGGRGIIGMEMKEEDFVENLFVSSTHNYILFFTNRGRLYWQKVYEIPEGSRQSRGKAIVN
LLELQEGEAVNAMIPVKEFAEDKYLFMATRAGTVKKTPLSEFRNPRRAGIIAVSLDEGDE
LVKVLLTDGKQEIVMVSKKGKAIRFSEEDVRPMGRTARGVRGMTLDGPDDEVVSLDLVDE
TTTLLTVTENGFGKRTEYSQYPVYRRGGKGVITIVTNLRNGFVSNVKSVAEDDELMFTSA
EGIIIRIPAKDISIQGRNTQGVRVMNIKSGDKVGGMARIKNGKEDEKLKQTALSRKTAKE
TGAETEDEEVEEDEVEELDEFEDIDESEEEEIEEVEDEEEDEDEEEY
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatatgaagataaaaacaaatcagaagcagaaatgaagaaatcataccaggca
acccttattccggaagacccgtcagaagacacggctgaagaaccggaaacagaagaatta
tcaggctttacatccggagagcctgatgaaccccagacggataaagaatccagcttcgaa
gaagaaatcggaatcgatactgacttcgaagacccgggcgatgaggaaccggtaagagca
ggagttacccccatccttattgacgacgagatgaaacgctcctacattaactatgcaatg
agcgtaattgtcggaagagctctccctgacgcacgtgacggtttaaagcctgtccaccgc
aggattcttttctccatgaatgagtccgggattacccacgacaagccctacaaaaagtcc
gcccgtattgtgggagacgtgctcggtaagtatcaccctcacggagattctgcagtttat
gacagtatcgtacgcatggtccaggacttttcgctcagatatcctttgatcgacgggcag
ggtaacttcgggtcaatagacggagactcggctgcagccatgcgatacaccgaagtccgt
atggacaggattgcaaaggagatgctggttgacatcgacaaggaaaccgttcctttcagg
cctaactatgacggctcccttgaagagccggaagtcctccctgcaaagcttccaaacctc
cttatcaacggctcaaccggtattgccgtgggaatggcaacaaacatggcgcctcacaat
ataagtgaggttattgacggaaccctgatgcttattgacaaccccgaaacgcaggtttcg
gaactgatgagcgttataaaaggtccggactttccaacaggtgcccatatcctggggact
tcaggcataagatccgcatacatgacaggcagaggtcctgtaaagatcagggcagttgct
gaaattcaggaacttaaaaaagacaggcagcagattatcgtaaccgagctcccttaccag
gtaaacaaggcaaggttgattgaaaatattgcccagcttgcacgggagaaggtaattaac
ggaatctcagacctgagggacgagtccgacagggaaggaatcagggttgtgatcgagctt
tcaaaaggcataaatcccaaggttgtcctgaaccagctctacaagcacactcagatggag
accactttcgggatcatcaaccttgcccttgtggacggaaagcccaaagagctgaacctg
aaacagcttctcgagatctacctggagtacaggatggaaattatccagaagcggacgcta
tatgacctgaggaagagtgaagaaagagcccatatcctggaagggttaaagatcgccctt
gacaatatagacgcagttgttgcccttatcaagagttctgcaaatggcgatgaagcaaaa
cagggtttaatggacaactttgcccttgacgaggttcaggcaaaagctatcctggatatg
cgcctgcagcgtctgacagggcttgagactcagaaaatccttgaagaacttgaagctctc
ataaaactgatcgccgaactcaggaagatactggcaagtgatgagctcaagtacgaaatc
atcaggaccgaacttattgagctcaaagaaaagtacggggacacccgcaggacaaagatt
gtacatcacactgaagatgtgactgatgaagacctgatccccgaacaggacgttgtggta
acaatcacaaatagtggctacataaagcgcattccgcttgctacctacaccatgcagcgc
cgcggaggcagaggaattatcggcatggaaatgaaggaagaagatttcgttgaaaatctc
ttcgtttcgtcaacccataactacatcctcttcttcacaaacaggggcaggctctactgg
cagaaagtctacgagattcctgaaggctcccgccagtcaagaggcaaagccatagttaac
ctgcttgagttgcaggaaggcgaagctgtcaatgcaatgatccctgtaaaagagtttgcc
gaagacaaatacctctttatggcaacaagggcaggcacggtcaagaagaccccgctttcc
gagttcaggaacccgagaagagccggcattatcgcagtcagccttgacgaaggcgacgag
cttgttaaggtcctccttaccgacggaaaacaggaaattgtgatggtttcaaagaaaggc
aaagccatccgcttttccgaagaagacgtccgtcctatgggcaggactgctagaggagtc
cgcggcatgacccttgacggcccggatgatgaggtagtcagcctggacctggtcgacgag
accacaaccctcctgacagtgaccgaaaacggctttggtaaaaggacggaatactcccag
taccctgtgtaccgccgtggtggaaaaggagtgattacaattgtcacaaacctcaggaac
ggctttgtctcgaacgttaagtctgtagctgaagacgacgaactgatgtttacgagtgca
gaaggcatcattatccgcatccctgcaaaagacatctccatccagggcagaaacactcag
ggtgtacgggttatgaacattaaatccggggacaaagtcggcggtatggcaaggatcaaa
aacggaaaagaagacgagaagctgaaacagacagccctttccagaaaaacagcaaaagaa
acgggagctgaaacagaagacgaagaggtcgaagaggacgaagtcgaagaactcgatgag
tttgaagacattgacgaatccgaggaagaagaaatagaagaggtagaagacgaagaagaa
gatgaagacgaagaagagtactga
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