Methanosarcina horonobensis: MSHOH_2883
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Entry
MSHOH_2883 CDS
T03933
Name
(GenBank) DNA topoisomerase VI subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
mhor
Methanosarcina horonobensis
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhor03032
]
MSHOH_2883
Enzymes [BR:
mhor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MSHOH_2883
DNA replication proteins [BR:
mhor03032
]
Prokaryotic type
DNA Topoisomerases
MSHOH_2883
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
Top6b_C
HATPase_c
HATPase_c_3
KOW6_SPT51-2
MptE-like
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AKB79366
UniProt:
A0A0E3SEJ6
LinkDB
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Position
complement(3527357..3529222)
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AA seq
621 aa
AA seq
DB search
METPIAEELAKKQKSISVAEFFEKNRQILGFDSAPRSLITTVKEAVDNSLDACEEAGILP
DILVQVERTGQDYVTVIIEDNGPGIIREQIPKVFAKLLYGSRFHALKQSRGQQGIGISAA
VLYAQMTAGRHTKILSKTSPTAPAHYYELMINTSTNEPDILIDEIRDWFRPHGTQIELEM
KAAYVKGRRQSIYEYLKATAIVNPHARITLIDPDGNEEVFERATDKMPEPAEEILPHPEG
IELGTLMKMLHYTERQKLAPFLRYSFCKIGLLTAEEICKAAGLDPEIDPHALGRHEARKL
IEAFEKVKIMAPPTDCLSPIGEELIYRGLEKETTVDFIATSTRKPAVYSGNPFVVEVGMA
YGGNLPKEEKISIMRFANRVPLLYQQGGCVTTHAVEEIKWKQYGLNQPGGGIPIGPVILL
IHVASINVPFTSESKDAIADIPVIKEEVDLAIKDVARKLKHYLSKQSNLKKRREKEIIIT
KVLPKMAIKVANILEKDVPDINPVVANIMGNLLVHRKVKSNGDGTANVAIKVRNFGNSAY
SFKVHEMLPCKISGTKPEPKVVTMGNDYDYIWDLSAAAGSSKVLSYKIESATEEELRKLP
QLIVEGIEEELVTGAKAFKGV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccctattgcagaagaactcgccaaaaaacaaaaatcgataagtgtagcagaa
ttttttgaaaagaacaggcagatcctgggttttgactctgcgcctcgaagccttataaca
actgtaaaagaagcagtggacaactctctcgatgcctgtgaggaagccggaatcctgcca
gatattcttgtccaggttgagagaacaggacaggactatgtaaccgttattatcgaagac
aacggtccgggaattataagagagcagatccccaaagtatttgcaaaactgctctacggt
tcaagattccatgccctcaagcagagcagggggcagcagggaataggaatttcggcagcc
gtgctctatgcccagatgacagcaggcaggcacacaaaaattctctcaaaaaccagcccg
acagctcctgctcactactatgagctcatgatcaataccagcaccaacgagcctgatatc
ctgatagatgagatcagggactggttccgccctcacgggacccagatagagctggagatg
aaggctgcctatgtgaaaggaagaaggcagtcaatttatgaataccttaaagccactgca
attgtaaacccccatgccaggataactcttatcgatcctgacggcaatgaggaagtcttt
gaaagggctacggataaaatgcccgagcctgcggaagaaatcctgccccatcccgaaggc
atagaactcggaaccctcatgaaaatgctccattatacggagcgccagaaacttgctcca
ttcctgcgctactctttttgtaaaataggcctgctgactgcagaggagatttgcaaagct
gcaggacttgatccagaaatcgaccctcatgctctgggccgtcatgaagcaagaaagctg
attgaagcttttgagaaagtaaagattatggctcccccgacggactgcctttctcctatt
ggtgaagagctgatctacagggggcttgaaaaagagacaaccgtggacttcattgctaca
agcacaaggaaacctgccgtttattcgggaaacccctttgtagtggaagtagggatggca
tatgggggcaatctcccgaaagaagaaaagataagcatcatgcggtttgcaaaccgtgta
cctctactttaccagcagggcggttgcgtgaccacacatgccgtagaagaaatcaagtgg
aagcagtacggcttaaaccagcctgggggaggaattcccataggacctgttatcctcctg
atacatgttgcttctattaacgtgccttttacttccgaatcaaaggatgcgattgcagat
attcccgtgattaaagaagaagtggacctcgcaatcaaagacgttgcaagaaaactcaag
cattacctgagcaagcagagcaacctcaagaagcgccgggagaaagagattatcattaca
aaagtgcttccgaagatggcgataaaggttgcaaatatcctggaaaaagatgtccctgat
ataaatcccgttgttgcaaatattatgggaaacctgcttgtacacaggaaggtaaaaagt
aacggggacgggactgcaaatgtggcgataaaggtcaggaatttcgggaattctgcttat
tctttcaaggttcatgagatgctcccctgtaaaatcagcgggacaaaacccgaaccaaaa
gttgtaactatgggcaacgattacgattatatctgggatctctcggcagctgcggggtct
tccaaagtattgagctacaaaatagaatccgcaaccgaagaagaactacgaaaattacct
caattgattgtagaaggtattgaagaagaactggtaaccggggcaaaggctttcaagggt
gtttga
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