Methanosarcina horonobensis: MSHOH_3070
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Entry
MSHOH_3070 CDS
T03933
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mhor
Methanosarcina horonobensis
Pathway
mhor04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSHOH_3070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhor03019
]
MSHOH_3070
03009 Ribosome biogenesis [BR:
mhor03009
]
MSHOH_3070
04131 Membrane trafficking [BR:
mhor04131
]
MSHOH_3070
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mhor04147
]
MSHOH_3070
Messenger RNA biogenesis [BR:
mhor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSHOH_3070
Ribosome biogenesis [BR:
mhor03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSHOH_3070
Membrane trafficking [BR:
mhor04131
]
SNARE
SNARE associated proteins
Others
MSHOH_3070
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSHOH_3070
Exosome [BR:
mhor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSHOH_3070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_5
CDC48_2
AAA_16
AAA_14
AAA_22
TIP49
AAA_2
IstB_IS21
AAA_33
AAA_28
nSTAND3
AAA_7
AAA_25
RNA_helicase
Mg_chelatase
Sigma54_activat
Parvo_NS1
AAA_18
ATPase
DUF5906
NPHP3_N
AAA_17
Zeta_toxin
AAA_24
nSTAND_NTPase5
PhoH
NB-ARC
SLFN-g3_helicase
ABC_tran
DUF815
TsaE
bpMoxR
ATPase_2
Vps4_C
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
AKB79553
UniProt:
A0A0E3SI21
LinkDB
All DBs
Position
3760873..3763251
Genome browser
AA seq
792 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWE
QGIVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLILALPESMTQGGPELQFGEHANEII
KRHILKRPVFRGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITEATNIELR
KKPVQGYEKATRGVTTYEDIGGLGDEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIEKDEAEPQIEVEIEAAAKIADEIGTESVMGVEADEA
ALEREKKEKTNLYLMSLAERTQGFVGADLLALVQEAAMRCLRENLPDLDLERETIPPERL
EKIVVTKRNFEDALMEAEPSALREIFVEMPSVGWDDVGGLDEAKHAIIEAVEWPIKNPEK
FVRMGIKAPKGILLYGPPGTGKTLIAQAVAKESNANFISVKGPEMFSKWLGESEKAIRET
FKKARQVSPCVIFFDEIDSIAGMQGMESTDSRTSERVLNQLLTEMDGLETLKDVVIIAAT
NRPNLLDPAILRPGRFDRLVYVGSPDRRGRLKIFKIHTQNTPLAEDVDLENLAGITEGYV
GADIEAVCREAVMFALRENFDVEAIEMRHFREALKKVKPTITENIAQFYEKIEEQFKGGQ
RPVETAGLVGYR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttaaaggttgaaaaggcatatcctattgaccttggaagaggaatt
atccggcttgaccctacagcgctactgaaacttcagctctctcccggcgacattgtggag
ataagggggaagaaaaagaccacagcgaaggtatggagggcagacaggcaggattgggaa
caggggattgtgcgcattgataatttcattaggcaaaacgccggggtctctataggggag
aaagtgaccattaaaaaggtcgaagccccggaagcaaaaaagctgattctggcgcttccg
gaaagcatgactcagggcggacccgaactgcagtttggggaacatgcaaatgagatcata
aaacggcatatcctgaaaagacctgtgttcagaggagacataattcctattataaattcg
atgtctcagccaatgacagagtccctgacaacaagccaggtaatccccctggttgctgtt
gagacagaccctgcaaacacaattgtcctgattacggaagccacaaacattgaactccgg
aaaaagccggtacagggctacgaaaaagcaacaagaggcgtcaccacctatgaagacata
ggagggctgggcgacgagatcatgcgcgtccgcgaaatgatagagatgcctatgaaacat
cctgagctctttgctcaccttaatatagagcctccaaagggggttatcctgtacggcccc
ccaggaaccggaaagaccctgattgcaaaagccgtggcaaacgaatcaggagcgagcttc
cattatattgccggccctgaaattgtgggaaagttctacggggaaagtgaagaaaggtta
agaaagatcttcgaagaggcaacccaggacgctccttcagttatcttcattgatgagatt
gattccattgccccaaaaagggaaaacgtgacaggggaagttgaaagaagagtagttgcc
cagctcctcacccttcttgacgggatggaggaaagaggacaggtcgtggttatcggggcc
actaaccgtgtggacgcaattgaccccgcactcaggagacccggacgctttgacagggaa
atccatatcggagtgccggataccaaagacaggtacgagatcctgcagattcacacaagg
ggaatgccaatcgagaaagacgaggctgagccacagattgaagttgaaattgaagctgca
gctaaaatcgcagatgaaatcggaaccgaatctgtgatgggggtggaggctgatgaagct
gctctggaaagagaaaagaaagagaagacgaacctgtatctcatgtccctggctgagagg
actcagggctttgtgggagcagaccttctggctctcgtgcaggaagcagcaatgcgttgc
ctcagggaaaatctgcctgacctcgacctggaaagagaaacaattcctccagaaagactg
gagaaaatcgttgtcaccaaaaggaattttgaagatgccctgatggaagccgaaccctcg
gctctgagagagatctttgtcgagatgccttcggttggctgggacgatgtgggaggtctt
gatgaagcaaagcatgctatcatcgaagctgttgagtggcctattaaaaacccggaaaag
tttgtcaggatgggcataaaagctccgaagggaatcctgctttacggccctcccgggact
ggaaagaccctgatagcccaggctgttgccaaagagtcaaatgccaatttcataagcgtc
aagggcccggagatgttctcgaagtggctcggagagtcggaaaaggcaattcgggaaacc
ttcaagaaagcaaggcaggtttctccatgtgttatcttctttgacgagatcgactccatt
gctggaatgcagggtatggaatctacggacagccggacttcggaaagagtgctcaaccag
ttgctgactgagatggacgggcttgagacccttaaagatgtggtcataattgccgcaact
aacaggcctaacctgcttgaccctgcaatcctgcgccctggccgctttgacaggctggtt
tatgtcgggtcacctgaccgcaggggcaggctgaagatctttaagatccacacacagaat
acacctcttgcagaggacgtggaccttgagaaccttgccggtataacagaagggtatgta
ggcgcggatatcgaagcagtatgcagagaggctgtaatgtttgctctcagagagaacttc
gatgttgaagcgattgagatgaggcacttcagagaagctcttaagaaagtgaaacccaca
attaccgaaaacattgctcagttctatgagaagatagaggagcagtttaaaggaggtcag
agaccggtcgagacagctggattagtgggatacaggtaa
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