Methanosarcina horonobensis: MSHOH_3085
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Entry
MSHOH_3085 CDS
T03933
Name
(GenBank) DNA repair and recombination protein RadA
KO
K04483
DNA repair protein RadA
Organism
mhor
Methanosarcina horonobensis
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhor03400
]
MSHOH_3085
DNA repair and recombination proteins [BR:
mhor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSHOH_3085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
HHH_5
RecA
AAA_25
HHH
ATPase
HHH_2
IMS_HHH_1
DNA_pol_lambd_f
Cdd1
AAA_22
IMS_HHH
HHH_8
AAA_24
NACHT
SAM_BAF
DnaB_C
DUF4332
ATPase_2
ATP-synt_ab
RecR_HhH
TsaE
TrwB_AAD_bind
AAA_18
PhoH
LytR_C
Motif
Other DBs
NCBI-ProteinID:
AKB79568
UniProt:
A0A0E3SI32
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All DBs
Position
complement(3776734..3777711)
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AA seq
325 aa
AA seq
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MSEIALEELPGVGPATAEKLKEAGFNTIEAVAVASPSELATTAEIGESTAAKIINAARQA
ADIGGFETGDLVLERRKLVGKLTTGCAEFDEMMGGGIETQAITELYGEFGSGKTQVAHQL
AVNVQMDKEHGGLGGSVIIIDTENTFRPERITQMVKGLSEKYGMELNPEEFLQNIHVARA
YNSNHQILLVDSATDLANELKEMGKPVRLLIVDSLMAHFRAEYVGRGTLADRQQKLNKHM
HGLLRFGDLFNACVVVTNQVMAKPDAFFGDPTRPVGGHIVGHTATFRLYLRKSKGEKRII
RLVDSPSLPEGEAVVAVTMAGLTDQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatagcactcgaagaactgccaggagttggccctgctactgcagaaaaactc
aaagaagccggatttaacacaattgaagcagtcgctgtagcgtctccttctgaacttgca
actacagccgaaattggggaatcgactgctgcaaaaatcatcaatgccgcaagacaggct
gctgatatagggggatttgagaccggagatctcgtccttgaaagaaggaaattggtaggc
aaacttaccaccggttgtgccgagtttgatgaaatgatgggcgggggcatagaaacccag
gctattaccgaattgtacggagaattcggttcaggaaagacccaggtggctcaccagctc
gcagtgaatgtccagatggacaaagaacatgggggtcttggcgggtccgtcattataatc
gacactgaaaataccttcaggccggaaaggatcacccagatggtaaaggggctttccgag
aagtacggaatggaacttaatcctgaagaattcctgcagaacattcatgttgccagggca
tacaattcaaatcaccagatacttcttgtggactctgcaacagacctggcaaacgagctc
aaggaaatgggcaaacccgttcgcctcctgatcgttgactctcttatggctcatttcagg
gctgaatatgtagggcgaggaacccttgcagacaggcagcagaagctcaacaaacatatg
catggtctgctccgcttcggagacctgttcaacgcctgtgttgttgttaccaaccaggtt
atggcaaaacctgacgccttctttggcgaccccacaaggccagtcggagggcacatagtc
gggcacacggcaaccttcaggctttacctgcggaagtccaaaggagagaagagaattatc
cgtctcgtggactctcccagcctcccggaaggagaagctgttgttgcagttaccatggcc
ggacttactgatcagtga
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