Methanosarcina horonobensis: MSHOH_3317
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Entry
MSHOH_3317 CDS
T03933
Name
(GenBank) hypothetical protein
KO
K07463
archaea-specific RecJ-like exonuclease
Organism
mhor
Methanosarcina horonobensis
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
MSHOH_3317
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Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
DHH
DnaJ_CXXCXGXG
tRNA_anti_2
S1
RMI2
DUF5351
PucR-like_N
Motif
Other DBs
NCBI-ProteinID:
AKB79800
UniProt:
A0A0E3WWL5
LinkDB
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Position
complement(4055673..4057805)
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AA seq
710 aa
AA seq
DB search
MSKECPDCHGRGYEAISTEICPVCKGKGKSKSVDFMKISEKDIDSFLKNGAVCEKCKGKG
SIEVTRPCEACEGLGKIYTCKVCGVRIHNPQDTDEEICTTCSRSQHVYALDESCDLKDVE
AGKLYHGIVSSIASFGVFVDLNPHVRGLMHSSNVGVQPEVGDAVIVLVKSIKAGGKLDLI
PKTLTKYETIELEKELPLKNSSQIDTSMKGRLIRIEGEVIQIKQTSGPTIFTISDEGGFI
PCAAFESAGKRSYPHIDVGMIVSITGEVTPRDEQVQIEVMSMKLLTGEKEAAVKTRVEKV
IDEKAAPADIPFLIESEIMEKLKPRMLHVAKEIKKAILHSTPIILRHHADADGITSAIAI
ERAILPLITEIGGTDAEYYFYKRAPSKAPFYELADVTRDISFALEDYARHGQKMPLIIQV
DNGSTEEDVPAMRQASVYGIDMLVIDHHHPDDIVDQYLIGHVNPAHVGGDFGVTAGMLCA
EVARMINPGISDTIKHLPAVSAVGDRSEAPEAGRYISLVSDRYTLEELKEMALALDYEQF
WLKFSSGKGLIDDILDMGDHTIHKNLVSLLCEQANTMIKEQLETCLFNVKSQKLANGAIM
NVIDVENYAQKFTFPPPGKTSGEVHDVLVKRNPDKPVVTIGYGPDFAVIRSKGVLMNIPR
IVRELREEMKGAGVSGGGHLVVGSIKFVEGMRTEVLSRLAEKIASTEVEY
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggaatgtccagattgccacggacgtggctacgaagctatttcaactgagatc
tgccctgtatgtaagggaaaaggcaagtctaaatcagttgactttatgaaaatttcagaa
aaagatattgacagtttcttgaaaaatggtgcagtatgtgagaaatgcaaaggcaagggg
agtatcgaagttaccagaccctgtgaggcctgtgagggacttggaaagatctatacctgc
aaggtttgcggagtaagaattcataacccacaggatacggatgaagagatctgtactacc
tgttcacgttcccagcatgtttatgctctggacgagtcatgtgatcttaaagatgtggaa
gcaggaaagctttatcacggtatagtgagcagtatcgcctctttcggggtctttgtggac
ttgaaccctcacgtaagagggcttatgcattccagcaatgtcggggttcagccggaagtc
ggggatgctgtaatcgtcctggtaaaaagcattaaagcgggaggaaagctcgatcttatt
ccgaaaactcttacaaagtacgaaaccattgagcttgaaaaagagcttcctcttaagaac
tcctcccagatagataccagcatgaagggcaggctcatccggatcgaaggagaggttatt
cagataaaacagacaagcgggccgacaatcttcactataagcgatgaaggaggctttatc
ccgtgtgcagcttttgagagtgcagggaaacggtcttacccccatatcgacgtaggaatg
attgtctcgattaccggggaagtgactccaagggatgagcaggtccagattgaagtcatg
agcatgaaactgcttaccggagaaaaagaggctgctgtcaagacaagggtcgagaaggta
atcgatgagaaagccgcacctgctgatattcctttcctgatcgaaagcgagattatggaa
aagctcaaacccagaatgcttcatgtcgccaaagagatcaaaaaggcaattctccattcg
acacctattatcctcaggcaccatgccgatgccgatggaattacttccgcaatagccatt
gagcgagcaattcttccccttattacagaaatcggtggaacagatgcggaatactatttc
tataagcgtgctccttcaaaggctcctttttatgaacttgccgatgttacaagggatatt
tcctttgcactagaggattatgccaggcacggacagaaaatgcctcttattatccaggta
gacaacggctcaaccgaagaggatgtccctgctatgcgacaggccagtgtctacggcatc
gatatgcttgtcattgaccaccatcaccctgatgacattgttgaccagtatctgataggg
cacgttaaccctgctcatgtaggaggagacttcggggttactgcgggaatgctctgtgct
gaggtcgcccgtatgatcaatcccggcatcagtgatactataaagcaccttcctgctgtt
tcggcagtaggagaccgttctgaagccccggaggccggaaggtacatctccttggtctcg
gatcgctatacacttgaggaattaaaagaaatggctctggctttggattatgagcagttc
tggcttaaattcagcagtggaaagggtcttattgacgatatcctggatatgggcgaccac
acaatccacaaaaatctggtatctctgctttgcgaacaggcaaataccatgataaaagaa
cagcttgagacctgtctcttcaacgtcaaatctcagaaactggcgaatggcgcgattatg
aatgtaatagatgtcgaaaactatgcccagaagtttaccttcccgccaccgggaaaaacc
tccggggaagtgcatgatgtgcttgttaaaagaaacccggacaagcctgtagttactatt
ggctatggtcctgactttgctgttatccgttcaaaaggcgtgcttatgaatatccccagg
attgtcagggagcttcgcgaagaaatgaaaggtgccggagtcagcggaggcggacatctt
gttgtcggcagtatcaagtttgtggaaggaatgagaaccgaagtgctctcaaggcttgca
gaaaagattgcatctacggaagttgagtattaa
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