Methanosarcina horonobensis: MSHOH_3801
Help
Entry
MSHOH_3801 CDS
T03933
Name
(GenBank) cell surface protein
Organism
mhor
Methanosarcina horonobensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
NosD
Beta_helix
InlK_D3
Big_13
PKD_3
Bact_surface_Ig-like
aBig_2
Fn3_arc
DUF5124
Motif
Other DBs
NCBI-ProteinID:
AKB80284
UniProt:
A0A0E3SDW3
LinkDB
All DBs
Position
4666872..4669565
Genome browser
AA seq
897 aa
AA seq
DB search
MLAVQADNVKISGIKAIGASGSSYSGIYLSGCNNCVIENNKLMSNGRGIYLVSSKGCTVS
KNTITGNGYYGIVLGSCSGNTISGNTASDDARGIHVGSSDDNILSGNMVTSNSAYGIYVC
GLSDRNLVYNNYFNNTDVTIKSGIGNSYNITKTAGKNIVSGTYIGGNYWGKPDGTGFSDT
AVDRDGDGISDSAYTSITSSIYSDYLPLVNPSNPAAPDADFSSNVTSGNLPLNVLFTDAS
TGTATAWNWSFGDGTYSTLKNPVHTYSAAGNYTVKLTASNAAGNDTKIKENYIKVTTPQT
PAVNFWGSPVSGNAPLNVTFKDNTTGSPTAWNWSFGDGTYSTDQNPKHTYSAAGNYTVKL
TATNAAGSNTVTKSNYIKVTGSSLQTPIASFSSNITSGSAPLNVLFTDTSTGTPIAWNWN
FGDGTNSAVQNPVHAYSTAGNYTVVLTVSNAAGNTTVTKSNYITVTGTVAQKPVAAFSAS
PTSGNAPLNVTFTDSSTGSPVAWNWNFGDGTSSTEKNPAHTYSTAGNYTVTLTVTNAAGS
NTATKSSYISVGTTAQKPVINCWGSPRSGNAPLTVTFKDDSSGSPTAWNWSFGDGTTSTL
QNPKHTYSAAGSYTIKLTVTNAAGNTTATKNNYITVTGTSVQMPIAGFSSNVTSGNLPLS
VSFTDTSTGTPTAWNWSFGDGTYSTVKNPVHIYSTAGSYTVTLTATNAAGSNTATKSNYI
TVAGTSSQKPVASFSASPTSGNAPLGVSFTDSSTGSPTAWSWNFGDGTSSTQKSPTHTYS
TAGNYTVTLTASNTAGSNTVTKTNYITVTGTTAQKPVINCWGSPRSGTAPLTVYFKDSSS
GSPTSWNWSFGDGTTSTLQNPKHTYSAAGSYTIKLTVTNAAGSTTATKNNYIVVSKA
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgccgtgcaggcagataatgtaaaaattagcggcattaaagctattggagcaagc
gggtccagctactcagggatttacctgtcaggatgcaataactgcgtaattgagaataac
aagcttatgagcaacgggcgcgggatttatctcgtgagctcaaaaggatgtactgtttct
aaaaacacaattacgggtaatggatattatggaatagtactcgggagctgctccggaaat
accatttccggaaacactgcttctgatgacgcccgtggcatccatgtaggctcttctgac
gataacatcctttcgggtaatatggttacctcgaacagtgcctacggcatatacgtatgc
ggactcagtgacaggaacctcgtctataacaattacttcaataataccgatgtaactata
aaaagcgggataggaaattcctacaatattacaaaaactgcaggcaaaaacattgtcagt
ggaacctatattggtgggaactactggggaaaacctgatggcacgggcttttcagataca
gcagtagatagggatggggacggaatttcagattccgcatacaccagtataacgagcagt
atatactcggattatctgcccctcgtaaacccttccaaccccgcagcccctgatgcggat
ttcagcagcaatgttacctcaggaaacctgcccctgaatgtcttatttaccgatgcaagc
acaggaacggccaccgcatggaactggagttttggggacgggacatattcaactctgaaa
aatccggtgcatacatattcagcagcaggaaattatacggttaagctgacagcaagcaat
gcggccggaaacgatacaaaaataaaagagaattatatcaaggtgactacccctcaaact
ccggctgtaaacttctggggctctccggtctcaggaaatgcaccgctgaatgtaaccttt
aaagacaatactactggctcacccacagcatggaactggagtttcggagacggaacatac
tcaacagatcagaacccaaagcacacatattcagcagcaggaaactacacggttaagcta
acagcaaccaatgccgcaggcagcaatactgtgacaaaatcgaattacataaaagtgact
ggaagttctttgcaaactccgattgcaagtttcagcagcaatatcacttcaggaagtgca
ccattaaacgtcctgtttaccgatacgagtacaggaactcccattgcatggaactggaac
tttggagacggaactaattcagcagtccagaatcctgtacatgcttactccacagcagga
aattacacagtagtacttacggtaagcaatgctgcaggcaatactacggtaacaaaatca
aattacataacagttacaggaacagttgcacaaaaacctgtcgccgcattttcggcatct
ccaacttcaggaaatgcacccctgaatgtgacctttactgacagcagtacaggttcgcca
gtagcatggaactggaactttggtgacggaaccagttcaactgaaaaaaatccagcgcat
acttattcgacggcagggaactacacagtaacacttacagtaactaatgctgcaggcagc
aataccgcaacaaagtccagttatataagtgtggggacaactgcacaaaaaccggtcata
aactgctggggttctccgagatcgggaaatgcacccctaactgtaacttttaaggacgat
tcatccggctctcccacagcatggaactggagtttcggagacggaacgacatcaacactc
cagaatccgaagcacacatattcagcagcagggagttacacgataaaactgacagtaacc
aatgcagcgggaaacaccacggcaacaaagaacaattacataacagtcacaggaacatcc
gtgcagatgccgattgcaggatttagcagcaacgttacctccggaaatttgccattaagt
gtcagttttactgacacgagtacagggacgccaacggcgtggaactggagtttcggagac
gggacatactcaacagtcaagaatcctgtacacatatactccacagcaggaagttacacg
gtaacgctcacagcaactaatgctgcaggcagtaacacggcaacgaaatcaaattacata
acagtagcaggaacctcttcacaaaagccggttgcctcgttttcggcatctccaacctca
ggaaacgcaccattgggcgtcagttttactgacagcagcacaggttctccaacagcctgg
agctggaactttggtgatggaaccagttcaactcagaaaagtccaacgcatacttattcg
acagcaggaaactacaccgtaacacttacagcaagtaatacggcaggcagcaatacggtg
acaaaaacaaattatataacagtcacaggaacaacagcacaaaaaccagtcataaactgc
tggggctctcccaggtcaggaactgcacccctgactgtttactttaaggacagttcctca
ggctctcccacatcctggaactggagtttcggagacggaacgacatcaacactccagaat
ccgaagcacacatattcagcagcagggagttacacgataaaactgacagtaaccaatgca
gcaggaagcaccacggcaacaaagaacaattacatagtggtatcaaaggcctga
DBGET
integrated database retrieval system
