Methanosarcina horonobensis: MSHOH_4012
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Entry
MSHOH_4012 CDS
T03933
Name
(GenBank) Transcription factor S
KO
K03057
transcription factor S
Organism
mhor
Methanosarcina horonobensis
Brite
KEGG Orthology (KO) [BR:
mhor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhor03021
]
MSHOH_4012
Transcription machinery [BR:
mhor03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
MSHOH_4012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_4
Zn_Ribbon_TF
Cas12f1-like_TNB
FdhE_central
Zn_ribbon_RRN7
Ribosomal_S27e
CPxCG_zf
zf-BED
Zn_ribbon_IS1595
Zn_ribbon_3
GpA_ATPase
DUF5817
Ogr_Delta
Zn_ribbon_Nudix
HypA
zf-CHY
A2L_zn_ribbon
NANM
DUF7351
Zn_ribbon_RPB9
Cytochrome_C7
DUF7685
Zf_1st_IFT121
DUF2752
Baculo_LEF5_C
Desulfoferrod_N
Zn_ribbon_Brz
Motif
Other DBs
NCBI-ProteinID:
AKB80495
UniProt:
A0A0E3WV62
LinkDB
All DBs
Position
4903991..4904275
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AA seq
94 aa
AA seq
DB search
MFPKDGNYQCRKCGNIIPIENNAKNFVSKAKIDDHEVVVLEGEQTSGLPTTSVKCPECGN
NTAAWWLRQLRSADESETRFLKCTKCGFTWREYD
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctaaagacggtaattaccagtgcagaaagtgtgggaacataataccgattgaa
aataatgcaaagaatttcgtctccaaagccaaaattgacgatcacgaagtagtggtactc
gaaggtgaacagacctcaggcctgccaacaacgagtgtaaagtgccctgagtgtgggaac
aacacagcagcttggtggctcagacagctcaggtctgcagatgagtccgaaacgcgtttc
ctcaagtgtacgaaatgcgggttcacctggagagaatacgactaa
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