Microbacterium hominis: CXR34_06630
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Entry
CXR34_06630 CDS
T05238
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mhos
Microbacterium hominis
Brite
KEGG Orthology (KO) [BR:
mhos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhos03019
]
CXR34_06630 (hrpA)
Enzymes [BR:
mhos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CXR34_06630 (hrpA)
Messenger RNA biogenesis [BR:
mhos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CXR34_06630 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
Helicase_C
OB_NTP_bind
HA2_C
DEAD
AAA_22
AAA_19
T2SSE
WHD_HA2
nSTAND_NTPase5
nSTAND3
ResIII
NACHT
AAA_30
SLFN-g3_helicase
UvrD-helicase
FtsK_SpoIIIE
Zeta_toxin
SRP54
Motif
Other DBs
NCBI-ProteinID:
AUG29177
UniProt:
A0A2K9DI64
LinkDB
All DBs
Position
complement(1407727..1411743)
Genome browser
AA seq
1338 aa
AA seq
DB search
MPPVAPVISYPPELPVSAAREEISRAIATHQVVIVAGATGSGKTTQLPKICLELGRTRIA
HTQPRRIAARTIAERIAHELQVPLGGAVGYKVRFTDHVSDETQVALVTDGILLNEIHRDR
LLRRYDTIIIDEAHERSLNIDFLLGYLARILPERPDLKVVITSATIDPESFARHFADAEG
TPAPIVEVSGRTYPVEIRYRPHVPEAPVADRGPNATPVADRGPNAAPVVERGPKGRVETP
ADGDDVDALLAALRELDREADGDVLVFLPGEAEIRDAMDAVRGMYARDTRPTEVLPLYGR
LSAAEQHRVFEPSGVAGVRRRVILATNVAETSLTVPGIRYVVDAGTARISRYSVRSKIQR
LPIEAISQASAQQRSGRAGRTSHGIAIRLYGEDDFRSRPEYTEPEILRTSLASVILQMLS
LGFGDIEDFPFLTKPDSRGVKAAFDLLTELRAVTPSRRLTSLGREIARLPIDPRFARMLI
EARRLQVLPDVLAIVAGLSIQDVRERPSVEDGAGREQADRLHARFTDPTSDFLTLLNLWN
HLQQQQRELGSSAFRRLCRSEFLNYVRVREWVDVHRQLRQLMGTSSRTAAGDSPRTDGSA
ADPALVHRAILAGLLSHIGILDTRSVAAKASGRPADKRKPIPVFRGARGSAFAIFPGSAL
RKATPDAVMAAELVETSRLFARTVAAIDPAWAEELAGDLAHRQLSDPHWSKDAGAAVAAE
KVTLFGVEIIPRRRVQLARIDRPLARELFVRHALVDGDWNSQHLDKRLTAFERRNLDLRR
RLEKVEERERRRDILVGDEAVFAFYDSRLPSDVFDVRSFESWWRDASARTPRLLDMTEAD
LQGDASRSDERAFPGRWHQGDQVLSLAYRFEPGDPEDGVSVVVPLPLLAGLRPDGFDWQV
PGLRAELTTALLKALPKAIRRHVVPAADWAARLGEELSDAGPEHHDGLPPQTLRAALATR
IQRIANQPVTVADFDLDRVPSHLLVTFRAVDHRGRSVGTSRDLGELQDRLASRAREQVAR
TLARETPPAARVARAAAGAPPAAAAAAAPALAERTGILTWDLGTLPEVVDTKVAGGVVRG
YPALVDEKDAVALRIEATPERAERLTHAGVRRLLLLAVSSPSAYVLDHLTAAEKLSLAAS
PYPSAKALIEDARVAVADAVRDRVAPGGVRTPEQFAAVRDAFSAAVVDELFQAVSLTARI
LTLQRDVDRAIKGQNSMTLLTALGDVKGQLAGLIFPGFVSRSGLDRLRHLPRYLQGALER
VRTLADNPGRDRQRLTEFERAAALYADAGGTLPLPADATPALTHARWLLEEYRVSLFAQA
LGTAEPVSLPRITKALSA
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccgtcgcccccgtgatctcctaccctccggagctgcccgtcagcgccgcgcgg
gaggagatctcgcgcgccatcgcgacgcatcaggtggtcatcgtcgccggcgcgaccggt
tcgggcaagacgacgcagctgccgaagatctgcctggagctcggccgcacccgcatcgcc
cacacccagccgcgccgcatcgccgcacgcacgatcgcggaacgcatcgcgcacgagctg
caggttcccctcggcggcgccgtcggctacaaggtgcgcttcaccgatcacgtctccgat
gagacgcaggtcgctctggtcaccgacggcatcctgctcaacgagatccaccgcgaccgg
ttgctgcgccgctacgacacgatcatcatcgacgaggcgcacgagcggtcgttgaacatc
gacttcctcctgggctacctcgcccggatcctcccggagcgtcccgacctcaaggtcgtg
atcacgtcggcgacgatcgacccggagagcttcgcacggcacttcgcggatgcggagggc
acccccgcgccgatcgtcgaggtctccggccgcacgtacccggtcgagatccgctaccgt
ccgcacgtccccgaggccccggtcgccgaccgaggcccgaacgccaccccggtcgccgac
cgaggcccgaacgccgccccggtcgttgagcgaggcccgaagggccgagtcgaaacgccc
gccgacggcgacgacgtcgacgcgctgctcgccgcgctgcgcgagctcgatcgcgaggcc
gacggtgacgtgctcgtcttcctgcccggtgaagccgagatccgcgacgcgatggatgcc
gtgcgcggcatgtacgcaagagacacccgcccgaccgaggtcctccccctctacggccgt
ctgtcggcggcggagcagcaccgcgtcttcgagccgtccggcgtcgccggggtgcggcgc
cgggtcatcctcgccaccaacgtcgccgagacgagcctcaccgtccccggcatccgctac
gtcgtcgacgcgggcaccgcgcgcatctcgcgctacagcgtccgctccaagatccagcgc
ctgccgatcgaggccatctcgcaggcctcggcgcagcagcgctccggccgtgcgggacgc
acgtcgcacggcatcgcgatccggctgtacggcgaggacgacttccgctcgcggccggag
tacaccgagcccgagatcctccgcacgtcgctcgcgtcggtcatcctgcagatgctctcc
ctcggattcggcgacatcgaggacttcccgttcctgaccaagcccgacagccgcggggtc
aaggctgcgttcgacctgctcaccgagctgcgcgccgtcacgccgtcgcggcggctgacg
tcgctcggacgcgagatcgcacgcctcccgatcgatccgcggttcgcgcgcatgctgatc
gaggcgcggcgcctgcaggtgttgcccgacgtcttggccatcgtggccgggctgtccatc
caggacgtgcgcgagcggccgtcggtggaggacggcgccggacgcgagcaggccgatcgg
ctccacgcgcggttcaccgacccgaccagtgatttcctcaccctgctcaacctctggaac
cacctgcagcaacagcagcgtgagctcgggtcgagcgcgttccggcggttgtgccgcagt
gagttcctgaactacgtccgcgtgcgcgagtgggtcgacgtgcaccgacagctgcgtcag
ctgatgggcacgtcctcgcgcaccgccgcgggcgactcgccgcgcaccgacgggagcgcc
gccgatcccgccctggtccatcgcgccatcctcgcggggctgctctcccacatcggcatc
ctcgacacccgctccgtggcggcgaaggccagcggccggcccgccgacaagcgcaagccg
atcccggtgttccgcggcgcacgcgggagcgcgttcgcgatcttccccggttcggcgctg
cgcaaggccacccccgacgccgtcatggccgccgagctcgtcgagacgtcgcgtctgttc
gcgcgcaccgtggcggcgatcgatccggcgtgggccgaggagctcgccggcgatctcgcc
caccgccagctgagcgatccgcactggtcgaaggatgccggcgccgccgtcgccgcggag
aaggtcacgctcttcggcgtcgagatcatcccccgccggcgggtgcagctggcgaggatc
gaccggccgctggcacgcgagctgttcgtgcggcacgcgctcgtcgacggcgactggaac
agccagcacctcgacaagcggctgacggccttcgaacggcgcaacctcgacctgcgtcgc
cgcctcgagaaggtggaggagcgcgagcgccgccgcgacatcctggtcggagacgaggcc
gtcttcgccttctacgactcccgcctgccgtccgacgtgttcgatgtgcgctcgttcgag
tcgtggtggcgcgacgcctcggcgcgcaccccgcggctgctcgacatgaccgaggccgac
ctgcagggcgacgcgtcgcgttccgatgagcgcgcgttcccgggccggtggcatcagggc
gatcaggtgctctccctcgcgtaccgcttcgagccgggcgatcccgaggacggcgtgagc
gtggtcgtcccgcttccgctgctggcggggctccgaccggacggcttcgactggcaggtc
ccggggctgcgcgcggaactgaccaccgcgctgctgaaggcgctgcccaaggcgatccgc
cgccacgtggtgccggccgccgactgggcggcccgcctcggcgaggagctcagcgacgcc
gggcccgagcatcacgacgggcttccgccgcagacgctgcgcgccgccctcgcgacccgc
atccagcgcatcgcgaaccagccggtgacggtcgccgatttcgacctcgaccgcgtgccc
tcccacctgctcgtgacgttccgcgccgtcgaccaccgcggccgctcggtcggcacctcg
cgcgatctgggcgagctgcaggatcggctcgcgagccgtgcccgtgagcaggtggcgcgc
accctcgcgcgcgagacgccgcccgcggcccgcgtcgcacgggcggcggccggcgcgccg
cccgccgccgcggccgccgcggcccccgctctcgcggagcgcaccggcatcctcacgtgg
gacctcggcacgctgccggaggtggtcgacaccaaggtcgccggcggcgtcgtgcgcggc
taccccgctctcgtcgacgagaaggatgccgtcgccctgcgcatcgaggcgacgccggaa
cgggccgaacgcctgacccatgccggcgtgcgccggttgctgctgctggccgtctcctcc
cccagcgcctacgtgctcgatcacctcaccgcggccgagaagctctcgctggccgcgtcc
ccgtacccgtcggccaaggctctcatcgaggatgcgcgcgtcgcggtcgccgacgccgtg
cgggaccgcgtggcccccggcggcgtacgcacgccggagcagttcgcggccgtccgcgac
gcgttctcggccgccgtggtcgacgagctcttccaggcggtgtcgctcacggcgcgcatc
ctcacgctccagcgcgacgtcgacagggcgatcaagggccagaactcgatgacgctgctc
accgcgctgggcgacgtgaaggggcagctggcgggactgatcttcccggggttcgtgtcg
cggtccggtctcgaccgcctccggcacctgccgcgttacctgcagggcgcgctcgaacga
gtccggaccctcgccgacaaccccggccgcgaccggcagcggctgaccgagttcgagcgc
gccgccgcgctctacgccgacgcggggggcacgctgcccctgcccgccgacgcgacgccg
gcgctgacgcacgcgcggtggctgctggaggagtaccgggtgagcctgttcgcgcaggcg
ctcggcaccgccgagccggtctcgctcccccgcatcaccaaggcgctcagcgcctga
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