Microbacterium hominis: CXR34_09970
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Entry
CXR34_09970 CDS
T05238
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mhos
Microbacterium hominis
Pathway
mhos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CXR34_09970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhos03019
]
CXR34_09970
03009 Ribosome biogenesis [BR:
mhos03009
]
CXR34_09970
Enzymes [BR:
mhos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CXR34_09970
Messenger RNA biogenesis [BR:
mhos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CXR34_09970
Ribosome biogenesis [BR:
mhos03009
]
Prokaryotic type
rRNA processing factors
CXR34_09970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
AUG29737
UniProt:
A0A2K9DJQ4
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All DBs
Position
2051863..2054319
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AA seq
818 aa
AA seq
DB search
MADDNNDQSTIAADGALNAPQSTAATAHEPADAEVAPAATETAAETSAEPETAAEPETSA
ADIAPEPAPADAAPAEAAPADAAPAEAEAPKTPASDTPSAETDAAAAEEPAKDEPLTAVS
LGLLPADFVSAVSTQLVFYAPAIAPLPPRPGARPESRDEREEQGPDSGSSARRRNRRRGG
GGSASDADDAPREQNQPRRRAVELITEPQRIKGSTRLEAKKQRRRDGREAGRRRTVVTEA
EFLARREAVDRDMIVRSKNGRIQIAVLEDNVLVEHYVARSQESSLIGNVYLGRVQNVLPS
MEAAFVDIGRGRNAVLYSGEVDWDAVETGNQPRRIELALKSGDRVLVQVTKDPVGHKGAR
LTSQISLPGRYLVYVPGGAMNGISRKLPDTERARLKRILKEVLPESSGVIVRTAAEGATE
EQLTRDVQRLTAQWEHISTQVETIGAPALLHSEPDLLVKIVRDVFNEDFSKMLIQGEDAY
QTITAYLAGVAPDLLERVEKYEDDQDPFDRFRVTEQIEKALDRKVWLPSGGSLVIDRTEA
MTVVDVNTGKFVGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRD
LVLRRLVECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLLETFSEPCEVCAGRGVIVHHD
PVVKHRGSQAPSSNGGRRSRQSAPAGGNGASANGGTHVITESAKSALAQIAASTIHTTAE
DAAAQADATPVITLPDPENDAAAERPKRPRKKREPSTRATAEKKTEKDILLDSVLSALPE
PKAPGQGRGRRRVTTAALTGTPVAATPAGESAEAASGE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgacaacaacgatcagtccaccatcgccgcggacggggcgctgaacgccccc
caatccaccgccgcgaccgcccacgagccggccgacgccgaggtggcccccgcggcgacc
gaaaccgccgccgagacgtccgcggagcccgagacggccgcggagcccgagacgtccgct
gcagacatcgcacccgagcctgctcctgcggacgcggctcccgcagaggccgctccggcc
gacgcggcgccggcagaggccgaggcgcccaagacccccgcgtccgacacgccctcggcg
gagaccgatgccgccgcggccgaggagcccgccaaggacgagcccctcaccgcggtcagc
ctggggctgctgcccgccgacttcgtctcggcggtctccacccagctcgtcttctacgcg
ccggccatcgcgccgctcccgccgcgcccgggtgcgcggcccgagagccgcgacgagcgc
gaggagcaggggccggacagcggctccagcgcacgccggcgcaaccgtcgccgcggggga
ggcggctcggcatccgacgccgacgacgcgccccgcgagcagaaccagccgcgccgccgc
gccgtcgagctcatcaccgagccccagcgcatcaagggctcgacgcgcctggaggcgaag
aagcagcgccgtcgcgacggccgcgaggccggccgccgtcgcaccgtcgtcacggaggcc
gagttcctcgcccggcgcgaagccgtcgaccgcgacatgatcgtccgctccaagaacggt
cgcatccagatcgccgtcctggaggacaacgtgctcgtcgagcactacgtcgcccgaagc
caggagtcgtcgctcatcggcaacgtctacctcgggcgcgtgcagaacgtgctcccgagc
atggaggcggccttcgtcgacatcggccgcggccgcaacgcggtgctgtactcgggtgag
gtggactgggacgccgtcgagaccggcaaccagccgcgacgcatcgagctcgccctcaag
agcggcgaccgtgtgctcgtgcaggtcacgaaggacccggtgggccacaagggcgcccgt
ctgacgagccagatctcccttcccggccgctacctcgtgtacgtcccgggcggcgcgatg
aacggcatctcccgcaagctccccgacacggagcgggcccgcctcaagcgcatcctgaag
gaggtccttccggagtcgagcggcgtcatcgtgcggacggcggccgagggcgccaccgag
gagcagctgacccgcgacgtccagcgcctcaccgcgcagtgggagcacatctccacgcag
gtcgagacgatcggcgcccccgccctgctgcactccgagccggacctgctggtgaagatc
gtccgcgacgtcttcaacgaggacttctcgaagatgctcatccagggcgaggacgcctac
cagaccatcacggcctacctcgcgggtgtcgcgcccgacctgctggagcgcgtcgagaag
tacgaggacgaccaggatcccttcgaccggttccgcgtgaccgagcagatcgagaaggct
ctcgaccgcaaggtgtggctgccgtcgggcggttcgctcgtcatcgaccgcaccgaggcg
atgacggtcgtcgacgtcaacaccggcaagttcgtcggctccggcggcaacctcgaagag
accgtcaccaagaacaacctcgaagcggccgaggagatcgtccgacagctccggctgcgc
gacatcggcggcatcatcgtcgtggacttcatcgacatggtgctcgagtccaaccgcgat
ctcgtgctccgccgcctcgtggagtgcctcagccgcgaccggaccaagcaccaggtcgcc
gaggtcacctcgctcggcctcgtgcagatgacccgcaagaagctggggctgggtctgctc
gagaccttcagcgagccctgcgaggtctgcgccggccgtggcgtgatcgtgcaccacgac
ccggtggtcaagcaccgcggctcgcaggctccgtcctccaacggcggtcgccgctcgcgt
cagagcgcgcccgccggcggcaacggcgccagcgccaacggaggcacgcacgtgatcacg
gagagcgcgaagtccgcgctcgcgcagatcgccgcctccacgatccacacgacggccgag
gatgccgcggcgcaggctgacgcgacgcccgtgatcacgctgcccgacccggagaacgac
gccgccgccgagcgccccaagcgcccgcgcaagaagcgcgagccgtccacgcgcgcgacg
gccgagaagaagaccgagaaggacatcctcctcgactccgtcctcagcgcccttcccgag
ccgaaggcaccgggacagggacgtggccgacgccgcgtgaccacggctgcactgaccggc
acgccggtggcggcgacgccggcgggggagtccgcggaggccgcgtcgggcgagtga
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