Microbacterium hominis: CXR34_13095
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Entry
CXR34_13095 CDS
T05238
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mhos
Microbacterium hominis
Pathway
mhos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CXR34_13095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhos03021
]
CXR34_13095
03019 Messenger RNA biogenesis [BR:
mhos03019
]
CXR34_13095
Transcription machinery [BR:
mhos03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CXR34_13095
Messenger RNA biogenesis [BR:
mhos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CXR34_13095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
Extensin_1
NACHT
PIP5K
Spore_III_AA
AAA_22
TP2
DUF1509
Motif
Other DBs
NCBI-ProteinID:
AUG30294
UniProt:
A0A2K9DWR3
LinkDB
All DBs
Position
complement(2708738..2710831)
Genome browser
AA seq
697 aa
AA seq
DB search
MESLSEIQTENIENVENTEAAGDAAATEVTDAPTAEETPAEETPVEEAAAEEAPAEEAPA
EEAPAEEPVAPEEPAAEAVQSEAPDVEVPSDAEAPAAASEEAPVVEKPVKAPRKRAPRRA
KSTDVPAAEATDAEAPAAETAAAETVVETADAPAAESADAPAETVAPAETPDTAAAATDA
IAPSGEGETAPAQDETAADAAAADATASGENAAEGETPSRSRSRSRSRSRNRGQRGENAQ
AAQNAPATQGGQNAPAAPAAPAEDNTSNDDADEQGQGRGRQRNKRRGGQNQNGDEFETEI
GEDDVLIPIAGILDVLDNYAFVRTTGYLPGASDVYVSLGQVKKYNLRKGDAVVGAIKQPR
EGEQSSRQKYNALVKVDAINGLSVDDAAERVEFGKLTPLYPQERLRLETAPEKLTQRIID
LVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRTV
KGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNISAPTSGR
VLSGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNSEL
RLSRQLADKRIFPAVDVNGSSTRREEMLLNPDEVKITWKLRRALAGLDPQQALEVVLGKL
KETSSNVEFLYQMQNVQMKSVSTTAGGHSHGHENSIR
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccctctccgagatccagaccgagaacatcgagaacgtcgagaacacggaagcc
gccggcgacgccgccgcgaccgaggtgaccgacgcccccaccgccgaggagaccccggcg
gaggagacccccgtcgaggaggccgccgccgaggaggctcccgcggaggaggctcccgcg
gaggaggctcccgcggaggagcccgtcgcgccggaggagcccgccgccgaggccgtccag
agcgaggcccccgacgtcgaggtgccctcggatgccgaggcccccgccgccgcgagcgag
gaggcgccggtcgtcgagaagcccgtcaaggcgccgcgcaagcgtgccccgcgccgtgcg
aagagcaccgacgtgccggccgccgaggcgacggatgccgaggctcccgccgccgagacc
gccgccgccgagaccgtcgtcgagaccgccgacgcgcccgccgccgagagcgcggacgcg
cccgccgagaccgtcgcgccggcggagacccccgacaccgcggctgcggcgaccgacgcc
atcgccccgtccggtgagggcgagaccgctcctgcccaggacgagacggctgccgacgct
gcagccgccgacgccacggcatccggcgagaacgcggccgagggggagaccccgagccgc
agccgcagccgttcgcgcagccgcagccgcaaccgcggccagcgcggcgagaacgcccag
gccgcgcagaacgccccggccacgcagggcggccagaacgcgccggccgctcccgcggcc
cccgccgaggacaacacgtcgaacgacgacgccgacgagcagggtcagggacgcggtcgt
cagcgcaacaagcgtcgcggcggacagaaccagaacggcgacgagttcgagaccgagatc
ggcgaggacgacgtcctcatcccgatcgccggcatcctggacgtgctcgacaactacgcg
ttcgtgcgcacgacgggctacctgcccggcgccagcgacgtctacgtctcgctcggccag
gtcaagaagtacaacctgcgcaagggcgacgccgtcgtcggcgccatcaagcagccgcgc
gagggcgaacagtcgagccgccagaagtacaacgcgctggtgaaggtcgacgccatcaac
ggcctgtcggtcgacgacgccgccgagcgcgtcgagttcggcaagctcacgccgctctac
ccgcaggagcgcctgcgcctggagacggcgccggagaagctcacgcagcgcatcatcgac
ctcgtcgccccgatcggcaagggccagcgcggtctcatcgtcgcgccgccgaaggccggc
aagacgatcgtcctgcagcagatcgcgaacgcgatcgcgacgaacaaccccgaggtccac
ctcatggtcgtgctcgtcgacgagcgccccgaagaggtcaccgacatgcagcgcacggtc
aagggcgaggtcatcgcctcgaccttcgaccgcccggccgaagaccacacgaccgtcgcg
gagctcgccatcgagcgcgccaagcgcctcgtggagctcggccgcgacgtcgtcgtgctg
ctcgactcgatcacgcgtctcggccgcgcctacaacatctcggcgcccaccagcggccgc
gtgctcagcggtggcgtcgacgcgtcggccctgtacccgcccaagcgcttcttcggtgcc
gcccgcaacatcgagaacggcggatcgctcaccatcctcgcgacggcgctcgtggagacc
ggctccaagatggacgaggtcatcttcgaggagttcaagggcaccggcaacagcgagctg
cgcctgtcgcgtcagctggccgacaagcgcatcttccccgccgtcgacgtcaacggttcg
tccacgcgccgcgaggagatgctgctgaaccccgacgaggtcaagatcacctggaagctg
cgtcgcgccctcgccggcctcgacccgcagcaggctctcgaggtggtcctcggcaagctc
aaggagacgagctcgaacgtggagttcctctaccagatgcagaacgtgcagatgaagtcg
gtgtccacgaccgccggcggccacagccacggacacgagaacagcatccgctga
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