Microbacterium hominis: CXR34_16475
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Entry
CXR34_16475 CDS
T05238
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhos
Microbacterium hominis
Brite
KEGG Orthology (KO) [BR:
mhos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhos03032
]
CXR34_16475
03400 DNA repair and recombination proteins [BR:
mhos03400
]
CXR34_16475
Enzymes [BR:
mhos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CXR34_16475
DNA replication proteins [BR:
mhos03032
]
Prokaryotic type
DNA Topoisomerases
CXR34_16475
DNA repair and recombination proteins [BR:
mhos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CXR34_16475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
AUG30898
UniProt:
A0A2K9DR73
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All DBs
Position
complement(3475663..3476625)
Genome browser
AA seq
320 aa
AA seq
DB search
MARLRRVRPGRDLGYRRVRSGTGFRYVDADGSPLPAAERDRVRALVIPPAWGDVWIAAAA
NGHIQATGVDEAGRMQYLYHPDWSTRRDKGKYARALELAERLPHARGRVTASLRRDDLDR
ERVLATAFRLLDQAAPRVGSERYFSAHGSRGLTTLQRRDALVDGSVTSLRFPGKSGKRQR
LDVDDADLAVVVGLLAAGRPAAPLLAYARGRRRVALTPKDVNAYVRAMTGGSFTAKDFRT
LRGTILAADALARIGPTSTKTDRKRAEVLAVRATATALGNTPAVAKSSYIDPRVFARYRR
GVLLDTSISPESAIRALLAS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgccttcgaagggtccggcccggccgcgacctcggctaccgacgcgtgcgctcg
ggcacgggattccgctacgtggatgccgacgggtcgcccctcccggccgccgagcgcgac
cgcgtgcgggcgctcgtcatcccgccggcctggggcgatgtgtggatcgcggcggcggcc
aacgggcacatccaggccaccggcgtggacgaggcgggccggatgcagtacctctaccat
ccggactggtcgacccgtcgcgacaagggcaagtacgctcgcgcgctcgagctggccgag
cgtctgccgcatgcgcgcggccgcgtcacggcatccctgcgccgcgacgatctcgaccgg
gagcgggtgctggccacggccttccgcctcctcgatcaggcggcgccgcgcgtgggcagc
gagcggtacttctccgcccacgggagccgggggctcacgacgctccaacgacgcgacgcc
ctcgtcgacggcagcgtcacgagcctgcgctttcccggcaagagcggcaaacggcagcgc
ctcgacgtcgatgacgccgacctcgccgtggtggtcggactcctcgcggcggggcggccc
gcggcgccgctgctggcctacgcgcgcgggcgtcgccgggtcgcgctcacgccgaaggac
gtgaacgcgtacgtgcgggcgatgaccggcggaagcttcaccgcgaaggacttccgcacc
ctccgcggcacgatcctcgccgccgacgccctcgcccgcatcggtccgacgtcgacgaag
accgatcgcaagcgcgccgaggtcctcgcggtcagagcgacggccacggctctgggcaac
acgcccgccgtcgccaagagctcgtacatcgacccgcgggtgttcgcccgctaccgacgc
ggggtcctgctcgacacctccatttccccggaatcggcgatccgcgccctcctcgcctcg
tga
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