Microbacterium horticulturae: PU630_07185
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Entry
PU630_07185 CDS
T10341
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mhot Microbacterium horticulturae
Pathway
mhot03018
RNA degradation
Brite
Enzymes [BR:
mhot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PU630_07185
Messenger RNA biogenesis [BR:
mhot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PU630_07185
Ribosome biogenesis [BR:
mhot03009
]
Prokaryotic type
rRNA processing factors
PU630_07185
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WEG10325
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Position
1520334..1522649
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AA seq
771 aa
AA seq
DB search
MTVDESNQSPDDQPKWDAAAQPPLIPEMPAAEAAQAWAAPAPVAADAETPAEPEGPAEAE
EPAEAEESAQQEKPAEPEESAEPEEPAEPEEPAEPEESSAPEQPARPEESPLPTAVSLGL
LSEEFVSAVSTDLHFYAPEITLLPPLPAPVQEGGSSRRRNRRRGEGRDDEQSGRERPVEV
ITEPQRIKGSTRLEAKKQRRRDGREAGRRRPVVTEAEFLARRESVDREMIVRSKNGRIQI
GVLEDKTLAEHYVARSQDASLIGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYSGEVDWD
GVETGNQPRRIELALKSGDRVLVQVTKDPVGHKGARLTSQISLPGRYLVYVPGGAMNGIS
RKLPDTERARLKRILKEVLPESSGVIVRTAAEGATEEQLTRDVQRLTSQWEHINRLVETQ
QAPALLHSEPDLLVKIVRDVFNEDFSKMLIQGEEAQRTIENYLQAVAPDLLERVERFEGD
GDPFDDFRITEQIEKALDRKVWLPSGGSLVIDRTEAMTVIDVNTGKFVGTGGNLEETVTK
NNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRLVECLSRDRTKHQVAEVTS
LGLVQMTRKKIGLGLVETFSEPCEVCAGRGIIVHHDPVVKHRGSSSSGSSRRQRPAPVPT
TTPAGGTHVITEGAKSALAKIAASTLHTVEGEEIPVEAPVAPPAEPERKKRKKRKDKESK
SHEPKTERDLLLDSVLNALPEPKAPGQGRSRRRVTTAALTGTPISTNPESD
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtcgatgagagcaaccagagtcctgatgatcagccgaagtgggatgccgcagcg
cagccgccactgatccccgagatgcctgcggccgaagccgcgcaggcatgggcggcaccc
gcgccggtcgcggccgacgcagagacgcccgcggagccggaagggcctgcggaagccgaa
gagcctgcggaagccgaagagtcggcgcagcaggaaaagcccgcggagccggaagagtcg
gcggagccggaagagcccgcggagccggaagagcccgcggagccggaagagtcatccgca
ccggaacagcccgcacggccagaggaatccccgctgcccacggccgtgagcctgggactt
ctgtccgaggagttcgtgtcggcggtgtcgaccgatctgcacttctacgccccggagatc
acgctgctgccgccgcttcccgcgccggtgcaggagggcgggtcttcgcggcgccgcaac
cgtcggcgcggcgagggccgcgatgacgagcagtccggtcgcgagcgcccggtcgaggtc
atcaccgagccgcagcgcatcaaaggttccacccggctcgaggccaagaagcagcgccgt
cgtgacgggcgcgaggccggacgccgccgccccgttgtgaccgaggcggagttcctcgca
cggcgcgagtcggtggatcgggagatgatcgtccgctcgaagaacggccgcatccagatc
ggcgtgctcgaagacaagaccctcgcggagcactacgtcgcccgcagccaggacgcgtcg
ctcatcggcaacgtatacctcggtcgcgtgcagaacgtgctccccagcatggaggcggcc
ttcgtcgacatcggccggggccgcaacgccgtgctgtactcgggtgaggtcgactgggat
ggtgtggagaccggcaaccagccgcggcgcatcgagctcgccttgaagtccggcgaccgg
gtgctcgtccaggtcacgaaggacccggtgggccacaagggcgcgcggctgaccagtcag
atctccctccccggtcgctacctcgtgtacgtgcccggcggcgcgatgaacggcatctcg
cgcaagctgcccgacaccgagcgcgcgcggctcaagcgcatcctcaaggaggtcctgccc
gagtcgtccggcgtcatcgttcgtacggccgccgagggcgccaccgaagagcagctgaca
cgcgacgtgcagcgtctcacgtcgcagtgggagcacatcaaccgtctcgtcgagacccag
caggcccccgcgctgctgcactcggagcccgacctgctcgtcaagatcgtgcgcgacgtc
ttcaacgaggacttctcgaagatgctcatccagggcgaggaagcgcagcgcaccatcgag
aactacctgcaggcggtcgcgcccgatctgctcgaacgcgtcgagcgtttcgagggtgac
ggcgacccgttcgacgacttccgcatcaccgagcagatcgagaaggcgctcgaccgcaag
gtctggctgccttcgggcggctcgctggtcatcgaccgcaccgaggccatgacggtcatc
gacgtgaacacgggcaagttcgtcggcaccggcggcaacctcgaagagacggtgaccaag
aacaacctcgaggcggcagaagagatcgtccggcagctgcgcctgcgcgacatcggcggc
atcatcgtcgtcgacttcatcgacatggtgctcgagtccaaccgcgacctggtactgcgc
cggctcgtggagtgcctgagccgcgaccgcaccaagcaccaggtggctgaggtcacctcg
ctgggtctcgtgcagatgactcgcaagaagatcggcctcggcctggtcgagacgttcagc
gagccgtgtgaggtctgcgccggccgcgggatcatcgtgcaccacgatcccgtcgtcaag
caccgcggttcgagcagcagcggctcgtcgcgccgtcagcgccccgcgccggtgcccacc
acgacgcctgcaggcggaacgcacgtgatcacggagggtgccaagtccgcgctcgcgaag
atcgcggcatccactctgcacaccgtcgaaggcgaagagatcccggtggaggcgcccgtc
gcaccgccggccgagcccgagcgcaagaagcgcaagaagcgcaaagacaaggaatcgaag
tcgcacgagcccaagaccgagcgcgacctgctgctggactcggtgctcaacgcgctgccc
gagccgaaggcaccgggccagggacgttcgcgtcgccgcgtgacgaccgccgcgctcacg
gggacgccgatctcgacgaaccccgagagcgactga
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