Microbacterium horticulturae: PU630_08420
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Entry
PU630_08420 CDS
T10341
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mhot Microbacterium horticulturae
Pathway
mhot03030
DNA replication
mhot03410
Base excision repair
mhot03420
Nucleotide excision repair
mhot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PU630_08420 (polA)
03410 Base excision repair
PU630_08420 (polA)
03420 Nucleotide excision repair
PU630_08420 (polA)
03440 Homologous recombination
PU630_08420 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhot03032
]
PU630_08420 (polA)
03400 DNA repair and recombination proteins [BR:
mhot03400
]
PU630_08420 (polA)
Enzymes [BR:
mhot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PU630_08420 (polA)
DNA replication proteins [BR:
mhot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PU630_08420 (polA)
DNA repair and recombination proteins [BR:
mhot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PU630_08420 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PU630_08420 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WEG10547
LinkDB
All DBs
Position
1762798..1765428
Genome browser
AA seq
876 aa
AA seq
DB search
MTDSAKPTLLIVDGHSLAYRAFYALPVENFSTKDGQHTNGIYGFLSMLINLIKAEQPTHI
AVAFDTSRVSFRTREYAEYKGTRSETPEEFRGQIPLLQECLAAMGITVLTAEEVEADDIL
ATLSTQGSAEGYQVLVCSGDRDSIQLVTDKVTLLYPSVQGVSQLKRYDPTTVMERYGVRP
EQYPDIAALVGETSDNLPGVPKVGEKTAVKWLNQFGSLDAILEGADQIKGVVGGNLREHL
DDVRRNRRLNHLLRDVPLAVTPADLAVKPIDTQAVRDIFSRLEFRTLTARLYEATGTVED
EPDLPSATAPEPAQLDAGALATWLADADGEVGVTVTIEGGVPHRLGFATMDAAAEASWSP
EVAASIGAWLASDAPKLLYDAKPQFKALRRAGAEIAGIIHDVLISGWLARPALPDKTLGN
LVERFLDEKLPEADPTQLVPEHEGATPGQLSWYVLRVAEVQRAQLPERVAAVLSEIEMPT
LVALADMELAGVAVSHEKLSAFSSELGTRADGIAQNAFSAIGREVNLGSPKQLQEVLFDE
LGLPKTRKTKTGYSTDAGALAALQESSPHPFLDLLLQHREATKLRQIIESLDVAIGSDHR
IHTTYLQTGSQTGRLSSTDPNLQNIPIRTDESHRIRAAFEVGEGYETLLTADYSQIEMRI
MAHLSGDPGLVEAFRSGEDLHRFVGSRVFGVEPAEVTPFMRTKVKAMSYGLVYGLSAFGL
SKQLRIEQSEAKQLMTEYFARFGAVRDYLRASVEKARIDGYTETIFGRRRPFPDLGSPNR
VLRENAERAALNAPIQGSAADIMKIALLRIHRQLRDEQLASRVLLQIHDELVVEIAPGEW
DVVEQIVRDRMGDAADLSVPLDVQIGRGPNWDEAGH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
gtgacggactccgcaaagcctaccctcctgatcgtcgacggccattccctcgcataccgt
gcgttctatgccctgccggtcgagaacttttcgacgaaagacgggcagcacaccaacggc
atctacgggttcctgtccatgctcatcaacctgatcaaggccgagcagcccacacacatc
gcggtcgcgttcgacacctcgcgggtgtcgtttcgcacccgcgagtacgccgagtacaag
ggcacccgctctgagacgcctgaggagtttcgcggccagatccccctcctgcaggagtgc
ctggccgccatgggcatcacggtgctgacggcagaagaagtcgaagccgacgacatcctc
gctaccctgtcgacgcaagggtcggccgagggctatcaggtgctggtgtgctcgggcgat
cgcgacagcatccagctcgtcaccgacaaggtgactctgctgtatccgagcgtgcagggc
gtctcgcagctcaagcgctacgaccccaccactgtcatggagcgctacggcgtccgaccc
gagcagtatcccgatatcgccgccctggtgggcgagaccagcgacaacctgccgggtgtg
ccgaaggtgggagagaagaccgcggtcaagtggctcaaccagttcggttcgctcgacgcg
atcctcgaaggcgccgatcagatcaagggcgttgtcggcggcaacctgcgtgagcacctc
gatgacgtgcgacgcaaccgtcggcttaaccatctgctgcgcgacgtgccgcttgcggtg
accccggccgacctcgccgtcaagccgatcgacacccaggcggtgcgcgacatcttctcg
cggctcgagttccgcacgctcactgcccggctgtacgaggcgaccggcaccgtcgaagac
gaacccgacctgccttcggcgaccgctcccgagcccgcacagcttgacgccggcgcgctg
gcgacctggctcgccgacgccgacggcgaagtcggtgtgaccgtcacgatcgagggtggt
gtgccgcaccggctcggtttcgcgacgatggatgccgcggccgaagcatcgtggtcgccc
gaggtggcggcatccatcggcgcgtggctggcatctgacgcgcccaagctcttgtacgac
gccaagccccagttcaaggcgctccgccgtgcgggcgctgagatcgcggggatcatccac
gacgtgctgatctccggatggctcgcgcgtcctgcgctgcccgacaagacgctcggcaac
ctcgtcgagcgcttcctcgacgagaagctgcccgaggccgacccgactcaactcgtgccc
gagcacgagggcgccacgcccgggcagctgtcgtggtacgtcctgcgggtcgccgaggtc
cagcgagcgcagctgcccgagcgggtggccgccgtgctcagcgagatcgagatgcccacg
ctcgtggcccttgccgacatggagctcgcgggcgtcgcagtctcgcacgagaagctcagc
gcgttctcgagcgagctgggcacgcgcgccgacgggattgcgcagaacgcgttctccgcg
atcggacgcgaggtgaatctcggctcgccgaagcagttgcaagaggtgctcttcgatgag
ctcggactaccaaagacccgcaagaccaagacgggatattcgaccgatgccggtgcgctg
gcggcgctgcaggagagcagcccgcatccgttcctcgacctgctgctgcagcaccgcgag
gccacgaaactgcggcagatcatcgagtcgctcgatgtcgccatcggctccgaccatcgc
atccacacgacctacctgcagaccggcagtcagacggggcgcctgtcgagcaccgatccg
aacctgcagaacattccgatccgcaccgatgagagccaccgcatccgcgcggccttcgag
gtcggcgagggctacgaaacactgctcaccgccgactattcgcagatcgagatgcgcatc
atggcgcacctctccggtgatccgggcctcgtcgaggcgttccgcagcggcgaagacctg
caccggttcgtgggctcgcgggtcttcggtgtcgagcctgccgaggtcacgccgttcatg
cgcacgaaggtgaaggcgatgtcgtacgggttggtgtacgggctgagtgccttcggtctg
tcgaagcagctgcgcatcgagcagtccgaggccaaacagctgatgaccgagtacttcgcc
cgtttcggcgcggtgcgcgactacctgcgtgcttccgtcgagaaggcgcgtatcgacggc
tacacggagacgatcttcgggcgccgccgcccgttccccgatctgggcagccccaatcgt
gtgctgcgcgaaaacgccgagcgcgccgctctcaacgccccgatccagggcagtgcggcc
gacatcatgaagatcgcgctgttgcgcatccatcgccagctgcgcgacgagcagctcgct
tcccgtgtgctcctgcagatccacgacgaactcgtcgtcgagatcgcgccgggggagtgg
gacgtcgtcgagcagatcgtgcgcgaccggatgggggatgccgcagacctgtccgttccg
ctggacgtgcagatcggccgcggaccgaactgggacgaagccgggcactga
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