Microbacterium horticulturae: PU630_12035
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Entry
PU630_12035 CDS
T10341
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mhot Microbacterium horticulturae
Pathway
mhot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PU630_12035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhot03400
]
PU630_12035
Enzymes [BR:
mhot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PU630_12035
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PU630_12035
DNA repair and recombination proteins [BR:
mhot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PU630_12035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
WEG07963
LinkDB
All DBs
Position
2508078..2508938
Genome browser
AA seq
286 aa
AA seq
DB search
MPEMPEVQGLVAFLDERVTGLQITRASVAAIAALKTYDPPIEALRGASITGVTRHGKFVD
IATDAAHLVFHLAKAGWLRWYDTLPSTIIKPGRTPIALRIALSDDSGFDLTEAGTKKSLA
VYVVRDPMDVPGIARLGPDPLDPSFTRDAFAALLTGKRTQIKGLLRDQAVIAGIGNAYSD
EILHAAKMSPYALAANLDDEAIDRLYAAMIETLQDAVATASGKPPADLKDAKRRGMRVHG
RRGEACPVCGDTVRSVFFADNSLEYCPTCQTGGKLLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgccggaggtacaagggctcgtcgctttcctcgacgagcgcgtgacggga
cttcagatcacgcgcgcctcggtcgcggcgatcgccgcgttgaagacgtacgaccctccg
atcgaagcgctgcgcggggcatccatcaccggcgtcacacgtcacggaaagttcgtcgac
atcgcgacggatgccgcgcacctcgtcttccacctcgccaaggccggctggctgcgctgg
tacgacacgctgccgtcgacgatcatcaagccggggcgcaccccgatcgcgctgcggatc
gccctgtcggacgactcggggttcgacctcacggaggcaggcaccaagaagtcactcgcg
gtgtacgtcgtgcgcgacccgatggatgtgcccggcatagcgcggctcggtcccgacccg
ctcgacccgtcgttcacgcgcgacgcgttcgcggcgctgctgaccggcaagcgcacccag
atcaaggggctcctgcgcgatcaggccgtgatcgccggtatcggcaacgcctactccgac
gagatcctgcacgcggccaagatgtcgccctacgcgctggccgcgaacctcgacgacgag
gcgatcgaccgactgtacgcggccatgatcgagacgctgcaggatgccgtggccaccgcc
tccggcaagccgcccgccgatctcaaagacgcgaagcgccggggcatgcgcgtgcacggg
cgccggggcgaggcatgccccgtctgcggcgataccgtgcgcagcgtgttcttcgccgac
aacagcctggagtactgccccacctgccagaccggcggaaagctgctcgccgaccgccgc
ctgtcccgcctgctcaagtag
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