Mannheimia haemolytica USDA-ARS-USMARC-183: D650_13910
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Entry
D650_13910 CDS
T02523
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mhq
Mannheimia haemolytica USDA-ARS-USMARC-183
Brite
KEGG Orthology (KO) [BR:
mhq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhq03032
]
D650_13910 (gyrB)
03400 DNA repair and recombination proteins [BR:
mhq03400
]
D650_13910 (gyrB)
Enzymes [BR:
mhq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D650_13910 (gyrB)
DNA replication proteins [BR:
mhq03032
]
Prokaryotic type
DNA Topoisomerases
D650_13910 (gyrB)
DNA repair and recombination proteins [BR:
mhq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D650_13910 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AGI32660
LinkDB
All DBs
Position
1066693..1069125
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AA seq
810 aa
AA seq
DB search
MSEQTQATSYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGH
CKDIIVTIHSDNSVSVQDDGRGIPVGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGL
HGVGVSVVNALSSKLQLTIRREGHVHEQFYSLGEPDAPLAIIGNTEKTGTSVRFWPSLDI
FKNKTEFEYKILSKRLRELSFLNSGVSIKLIDERDGKEEHFKYEGGIKAYVEYLNEGKTH
IHNTPFYLTTEKDGIGVEISLQWNDSYNENVYCFTNNIPQRDGGTHLAGFRGALTRALKN
YMDNSGVLKKADANIDASGDDAREGLVAVISVKVPDPKFSSQTKDKLVSSEVRGAVESSM
NEALSDYLAENPDDAKNIVTKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQEK
DPALSELYLVEGDSAGGSAKQGRDRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITA
LGTGIGRDDYNLEKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPELIENGYIYIAQPP
LYKVKKGKQERYIQDNDEMSQYEIDIALEGAGLYVSEDAPALSGVALENLIAQYNGVQKL
IERLSRRYPTLLLNELIYSKPLSVEFAKNQANMTAWSEQFVATLMAKEVGGSFYRINTLF
NEERQIYEPEIIVTTHGMDSTYRLDYNFINGNEYARIVALGNELNDLLSDSAYVVRGERR
QEISSFAEALDWLVKESRKGLTIQRYKGLGEMNPEQLWETTMDPVARKMLQVNITDAIAA
DKLFSTLMGDEVEPRRDFIETNALYAQLDI
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaaactcaagcaacaagttatgattcttccagtattaaggtgttacgcggc
ttagatgcggtgcgtaaacgcccgggaatgtatatcggcgataccgatgacggtacgggc
ttacaccatatggtgtttgaggtggttgataatgcgattgacgaagcattagccgggcat
tgtaaagacattattgtcacaattcattccgataattcggtttctgtgcaagatgacggt
cgtggaattccggtggggattcacccggaagaaggcgtttcggcagcagaagtcattatg
actgttcttcacgcaggcggtaaatttgacgataactcctataaggtttccggcggtttg
cacggtgtgggcgtatcggtggtgaatgcactttcctctaaattacaactcactattcgc
cgtgaaggacacgttcacgagcaattctatagcttaggtgagcctgatgcacctttagcg
attatcggcaataccgaaaaaacggggacgtcggttcgtttctggccaagtttggatatt
ttcaaaaataaaaccgaatttgaatataaaattctgtctaaacgcttgcgtgaactatca
tttttgaattcaggcgtttcgattaaattaattgatgaacgagacggcaaagaagagcat
tttaaatatgagggcggtattaaagcctatgttgagtatttaaacgaaggcaaaactcat
attcacaatacgccattctatttgaccactgagaaagacggcattggcgtggaaatttcc
ctacagtggaatgacagttacaacgaaaatgtgtactgctttaccaataatattccacag
cgtgatggcggtacgcacttagccggtttccgtggggcattaactcgtgcgttgaaaaac
tatatggataacagcggggtattgaaaaaagccgatgcgaacattgatgcctcaggtgat
gatgcccgtgaaggtttagtagcggtgatttcggtgaaagtgccggatccgaaattctcc
tcacaaaccaaagataaattggtgtcgtcagaagtgcgtggagcagtggaaagctcaatg
aatgaggctttatccgactatttagccgaaaatccggacgatgcaaaaaatatcgttacc
aaaattattgatgcagcccgtgcaagagaagcagctcgtaaagcccgtgaaatgacccgc
cgtaaaggggcgttagatttaggcggcttaccgggtaaattagctgattgtcaggaaaaa
gatccggcgttatcggagctttacttggtggagggtgactctgccggtggctcggcaaaa
caagggcgtgaccgtaaaaaccaagcgattttgccgttaaaagggaaaattctgaacgtg
gaaaaagcccgctttgataaaatgctttcttcacaagaagtagcaaccttgattaccgct
ttaggcacaggcatcgggcgtgatgattataatttggaaaaattacgttaccacaaaatc
attattatgaccgatgcggacgtggatggtgcacatattcgtacgcttttattaactttc
ttctaccgtcaaatgccggagctgattgaaaacggctatatttatattgcacagccaccg
ctttataaagtgaaaaaaggcaagcaagagcgttatattcaagataacgatgaaatgtcg
caatatgaaattgatattgcattagaaggtgcaggcttatatgtgagtgaagatgctcca
gcgttaagtggcgtagcgttagagaacttaattgcccaatataacggcgtacaaaaatta
attgaacgtttaagccgtcgttacccaacattattacttaacgaattaatttattcaaaa
ccgctttcggtggaatttgcaaaaaatcaagcaaatatgaccgcttggagcgagcaattt
gtcgctacattgatggcaaaagaggtgggcggcagtttctaccgtattaataccttgttc
aatgaagaacgccaaatttatgagccggaaattattgtgactacacacggtatggacagt
acctatcgtttagattacaactttatcaacggtaatgaatacgctcgcattgtggcatta
ggcaacgagctgaacgatttactatctgattcagcctatgtggtgcgtggtgaacgtcgc
caagaaatcagcagttttgctgaagccttagattggttggtgaaagaatctcgtaaaggc
ttaactattcaacgttataaagggttaggtgagatgaatccggaacaattatgggaaacc
acgatggatccggtggctcgtaaaatgctacaggtcaatattaccgatgcgattgcggca
gataaactcttcagtacgctgatgggcgatgaagttgaaccacgccgagatttcattgaa
actaacgctttgtatgctcagttagatatttag
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