Mannheimia haemolytica USDA-ARS-USMARC-183: D650_25900
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Entry
D650_25900 CDS
T02523
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mhq
Mannheimia haemolytica USDA-ARS-USMARC-183
Pathway
mhq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D650_25900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhq03021
]
D650_25900
03400 DNA repair and recombination proteins [BR:
mhq03400
]
D650_25900
Enzymes [BR:
mhq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D650_25900
Transcription machinery [BR:
mhq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D650_25900
DNA repair and recombination proteins [BR:
mhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D650_25900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
FG-GAP_3
DUF6571
Motif
Other DBs
NCBI-ProteinID:
AGI33858
LinkDB
All DBs
Position
complement(2515002..2515991)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPHLVNIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIILTLNKSGIGPVTAADITHDGD
VEIVNPDHVICHLTDKNASINMRIRVQRGRGYVPASARLHTQNDDRPIGRLLVDARFSPV
DRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIRRAATILAEQLAAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagaatttttaaagccgcacttagtaaatattgaacaagttagt
tcaactcatgctaaagtgacattagagccgttagagcgtggttttggccatacattaggt
aacgcacttcgccgcattttactttcatctatgccgggttgtgcagttactgaagttgaa
attgatggtgtactgcatgagtacagcagcaaagaaggcgttcaggaagatattcttgag
gtattattaaaccttaaaggtctagcggtaaaagtgcaaaataaagatgatattattttg
acactaaataaatctggaattggccctgtaactgcagccgacatcacacacgatggcgat
gtagaaattgtgaatcctgatcacgtaatctgtcatttaacagataagaatgcatcaatt
aatatgcgcattcgtgttcaacgtggtcgaggttatgttcctgcatcagcacgtcttcat
actcaaaacgatgaccgccctatcggtcgtttattagtagatgcacgtttttcacctgta
gatcgcattgcttacaatgtcgaagctgctcgtgttgaacaacgtacagacttagataaa
cttgttattgagatggaaactaacggaacgttagatcctgaagaagctatccgtcgtgct
gcaacgattttagcagaacaacttgctgcattcgttgatttgcgtgatgttcgtcaacct
gaagtgaaagaagaaaaaccggaatttgatcctattcttcttcgtccagtagatgaccta
gagctgacagttcgttctgctaactgtttgaaagcagagacaattcactatatcggtgat
ttagtacaacgtacagaagttgaacttcttaaaaccccgaacttgggtaaaaaatctctt
acagagattaaggatgttcttgcttctcgtggtttatcactcggtatgcgccttgaaaac
tggccacctgcaagtattgcagaagactag
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