Mannheimia haemolytica USDA-ARS-USMARC-183: D650_8410
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Entry
D650_8410 CDS
T02523
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhq
Mannheimia haemolytica USDA-ARS-USMARC-183
Pathway
mhq03030
DNA replication
mhq03430
Mismatch repair
mhq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D650_8410
03430 Mismatch repair
D650_8410
03440 Homologous recombination
D650_8410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhq03032
]
D650_8410
03400 DNA repair and recombination proteins [BR:
mhq03400
]
D650_8410
Enzymes [BR:
mhq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D650_8410
DNA replication proteins [BR:
mhq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D650_8410
DNA repair and recombination proteins [BR:
mhq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D650_8410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGI32110
LinkDB
All DBs
Position
829124..832600
Genome browser
AA seq
1158 aa
AA seq
DB search
MSDCRFVHLKVHSDFSMINGLAKVKSLVKTAAANNMVAMGLTDFINFCGLVKFYGEALGA
GIKPIIGADVYVRTESGNEDYFELTLLAKNNKGYHNITQILSKAYQQGYVEFPMVEREWL
AELNEGIIILSGGRMGDVGKALLKENRQEAEEKLAFYQQYYPNHFYLSVCRTGRADEERY
IKQAVEFSQKNAIPLVAVNDVVFLKEDDFDAHEIRVAIHDSYTLDDPKRPKKYSPKQYFR
TEEEMCKLFADLPSALANTVEIAKRCSVTVRLGEYFLPNFPTGELSTEDFLVKKSKEGLE
ERLEFLFPDPEERANKRSVYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAET
YGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYSFVDRISKLIPPDPGMTLEKAFAAEPKL
PELYEADEEVKDLIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPLYCDSEGLHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALEMINERLAREGKEPIRIETIPLDDKKSFALLL
AAKTTAVFQLESRGMKDLISRLKPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEV
SYPDPQYQHECLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMA
AQREVFEKGAEAKGIDGKLAGQIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAE
FMAAVMTSEMDNTDKIVGFYDECMNMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGV
GEGPIEAILAARQKEGKFKDLFDLTARVDLKKINRRTFESLIMSGAFDKLGPHRAALMKN
LEDALKASDQHAKMEELGQSDMFGVLTETPEEVQNAYANTPKWSEQVILDGERATLGLYL
SGHPIGRFLKELSHYAPNRLNELQPTFRGQMTTVSGIVMASRVAVTKRGSRIGIATIEDR
SGKLDITLFSEALENFGHLMQQDQIIVATGSVQFDDFSGGLKMSAREVLSLDEARGRFAK
SLALAISKEQLSADFIKKMTAIITPHKEGTLPLHFYYQSPEGRVLLKGGVEWRISPNEAM
FSELKALLGENSVELEFE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattgtcgtttcgttcatttaaaagttcacagtgatttctcaatgattaatggt
ttagctaaggtaaaatccttagttaaaaccgctgccgctaataatatggtggcaatgggc
ttaacggattttataaacttttgcgggttggtgaaattctatggcgaagcattgggagca
gggattaagccgattatcggggcagatgtttatgttagaaccgagagcggcaatgaagat
tattttgagctgacattactggcgaagaacaacaaaggctaccataatattacccaaatt
ttgtccaaagcctatcagcaaggctatgtggaatttccgatggtggaacgtgaatggtta
gcagagctgaatgagggcatcatcattctttccggcgggcgaatgggcgatgtgggtaaa
gccttactcaaagaaaaccgacaagaagctgaagaaaaattagctttttatcagcaatat
tacccgaatcatttttacctttccgtttgccgtaccggacgggcagacgaagaacgctat
atcaaacaagcggtcgaattttcacaaaaaaatgcaattccgttagtggcggtaaatgat
gttgtcttcttgaaagaagatgactttgacgcacacgaaattcgggttgccattcacgac
agctacaccctagacgacccgaaacgcccgaaaaaatactcaccgaaacaatatttccgt
actgaagaggaaatgtgcaagctgtttgccgatttaccgagtgcattggcaaacacggtt
gaaattgcgaaacgctgttcggttaccgtgcgtttgggcgagtatttcctgccaaatttc
ccgaccggtgagctttccaccgaagatttcttggtaaaaaaatcgaaagaaggcttagaa
gagcgtttagagtttctattccctgatcctgaggaaagggcgaacaagcggtcggtttat
gacgaaagattgcaagttgaattagatgtgatcaaccaaatggggttcccgggttacttt
ttgatcgtgatggagtttatccaatggtccaaagataatgatattccggtaggaccgggt
cgtggctcaggggcaggctcattggtggcttatgcgttgaagattaccgatcttgaccca
ttggaatttgatttgctttttgagcgttttctcaaccctgagcgtgtttcaatgcccgat
tttgacgttgatttctgtatggacgggcgagaccgtgtgattgaacacgttgcggaaacc
tacgggcgacaagcggtatcgcaaattatcacattcggtactatggcggcgaaagcggtc
attcgagatgtagggcgagtgcttggacacccctatagctttgtggatcgcatctccaaa
ctcattccgcccgatccaggaatgacgcttgaaaaagcctttgccgctgagccaaaattg
cctgagctatatgaagccgatgaagaggtgaaagaccttattgatatggctcgtaagctc
gaaggtgtaactcgtaatgcaggtaaacacgctggtggtgtggtgatcgccccaactgcg
attaccgatttttcgccgctttattgcgatagcgagggcttacacccggttacccatttt
gataaaaatgacgtggaatatgcaggattggtgaagtttgacttcttaggcttgcgtacg
ctcaccatcatcaaatgggcgttggagatgattaacgaacgtttggctcgtgaaggcaaa
gagccgattcggattgaaaccattccgcttgatgataaaaaatcctttgctctgttgctg
gcagctaaaactacagcagtattccagcttgaatcacggggaatgaaagacttaatttct
cgcctgaagccggactgttttgaagatattatcgcattggtggcactattccgcccaggg
ccgctggaatcaggtatggtgcagaactttattgaccgtaaacacggcaaagaagaggtt
tcttatcctgatccgcaataccaacacgaatgcttaaaacctattctcgagccgacttat
ggggtcattgtttaccaagaacaggttatgcaaattgcacaagagcttgccggttataca
ctcggtggagcggacttactccgccgtgcaatgggtaagaagaaaccggaggaaatggct
gcacagcgtgaagtgtttgaaaaaggggcggaagccaaagggattgacggtaaacttgcc
ggtcaaatttttgacttggtagaaaagtttgccggctacggctttaataaatctcactca
gcagcttatgcgttggtttcttaccaaacactttggctaaaagcccattatccggcagaa
tttatggctgcggtaatgacctcagagatggataataccgataaaattgtcgggttctac
gatgagtgtatgaatatgggcttaaccgttgtgccgcctgatgtaaacagcggtaaacat
cgttttagcgtaaatgaaaaaggcgaaattgtttacgggctaggagcaattaaaggcgtt
ggggaaggaccgattgaggcaattctggcagctcgccaaaaagaggggaaatttaaagat
ctatttgatttaaccgctcgggtcgatctgaaaaaaatcaaccgccgcacctttgaaagc
ctgattatgtccggtgcttttgacaaattaggccctcaccgagctgccttgatgaagaat
ttggaagatgcacttaaagcctcagatcagcacgctaaaatggaggaactcgggcagagc
gatatgtttggcgtgcttaccgagacaccggaagaagtgcaaaatgcttacgccaatacg
ccaaaatggtcggagcaagtgattttagatggagagcgtgccacgctcgggctgtattta
agcggacacccgattggtagattcctcaaagaattatcccactatgcccctaatcggctg
aatgaattgcaaccgactttccgagggcaaatgaccacggtttcaggaattgttatggca
tctcgagtggcagttaccaagcgaggaagccgtattgggattgcgactattgaagatcgc
tcggggaaattggacattacccttttctcggaagccttagaaaatttcgggcatttgatg
caacaagaccaaattattgtggcaacaggttcggtacagtttgatgatttcagcggtgga
ctgaaaatgtcggctcgagaagtgttatcccttgatgaagcaaggggtcgatttgccaaa
agtttagcgttagcgattagcaaagagcaactttctgcagattttattaaaaaaatgacc
gctatcatcaccccacataaagaaggcactttaccgctgcatttttattaccaaagcccg
gaaggtagggtattgctcaaaggcggagtagagtggcgaatcagcccgaatgaggcaatg
tttagcgaattaaaggcacttcttggtgagaattcggttgaactggaatttgaatag
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