Mesomycoplasma hyorhinis HUB-1: MHR_0645
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Entry
MHR_0645 CDS
T01301
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mhr
Mesomycoplasma hyorhinis HUB-1
Pathway
mhr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MHR_0645 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhr03400
]
MHR_0645 (uvrB)
DNA repair and recombination proteins [BR:
mhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MHR_0645 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MHR_0645 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
Helicase_C
ResIII
UvrB
DEAD
UVR
AAA_30
AAA
Kinesin
AAA_22
Helicase_C_2
AAA_7
Microtub_bd
SWI2_SNF2
DUF87
T2SSE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADM22095
LinkDB
All DBs
Position
complement(792323..794329)
Genome browser
AA seq
668 aa
AA seq
DB search
MLFHLQSKKKDFYQKMFKLVSNFQPTGDQPKAIKALVDGIKNHKDHQVLLGVTGSGKTFT
MANVIAQLNRPVLILSHTKTLASQLYTEFKEFFPENRVEYFVSYFDFYRPEAYLPAKDVY
IDKTSQTNWDLEAMRMSALNALTLRRDTIVVSSVAAIYGSYNPKEYKQHFLNLELNQELK
PSDFAIELVKIQYSRNQVDTVPGSFSAKGDVFIISPAWTDKYLIKIEFFGNIIEKISKIH
PVDKKIIQTFTSYTIFPASAYTLSPNTIQTAIKTILTELDFQLNYFEKEGKLLEKQRLNE
RVLNDVDSLNNFGFCKGIENYARHIDQREAGEQPYSLLDYLPEDALIFIDESHEMITQLN
RMYKGDRSRKLSLVNYGFRLPSALDNRPLKFEEFEKFKQPKIYVSATPSNYEIDKADGEV
IHQLIRPTGLLDPVIEVRPTHSQIDEIYDLLQEQKSKNERTIILTTSKRSAEELSRYLES
KKQKVYYIHSTFTTFERDDILIKLRKGIYDAIIGINLLREGIDLPEVSLVIVLNADEESF
FRSKTSLTQFVGRAARSNHGKAIFFADKISKSMAATIADNQRNRAIQHQYNLDNNITPKP
VIKPIIQQIREKDQNKIISLIHNKNKETKAEKDKLIASLRKQMKDAAREENYELAIELQQ
VIAELEHS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgttgtttcatttacaaagcaaaaagaaggatttttatcaaaaaatgtttaaattagtt
tcaaattttcaaccaacaggagatcaaccaaaagcaattaaagctttagtggatggaata
aaaaatcacaaagatcatcaagttcttttaggtgttacaggttcagggaaaacattcaca
atggccaatgtaattgcacaattaaatcgccctgttttaatactttctcatactaaaact
ttagcttcacagttatatacagagtttaaagagtttttccctgagaatagagttgaatat
tttgtttcatattttgatttttatcgtccagaagcatatttgccagcaaaagatgtttac
atagacaaaacaagccaaacaaactgagatttagaggcaatgcgtatgtcagctcttaat
gcgcttactttaagaagagatacaattgttgtttcttctgtagctgctatttatggttct
tataatcctaaagaatataaacaacattttcttaatttagaactaaatcaagaactaaaa
ccttctgattttgcaattgaattagttaaaattcaatattcaagaaaccaagttgataca
gttcctggttcttttagtgctaaaggtgatgtttttattattagtcctgcttgaactgat
aagtacttaataaaaatcgaattttttggaaatattatcgaaaaaatttctaaaatccat
ccagtggataaaaaaataattcagacttttacaagctatacaatttttccagcttcagct
tatactttatcacctaatacaattcaaactgcaataaaaactattttaacagaattagat
tttcaactaaattactttgaaaaagaaggaaagttattagaaaaacaacgtttgaatgaa
agagttttgaatgatgttgattcactaaataattttggtttttgcaagggaattgaaaac
tatgcaagacacatagaccaaagagaagcaggagaacaaccttatagtttattagactat
ttgcctgaagatgcacttatttttatagatgaatctcatgaaatgattacacaattaaat
agaatgtataaaggtgatagatctagaaaactcagtttagtaaattatggttttagatta
ccttctgcactagataatcgacctttaaaatttgaagaatttgaaaaatttaaacaacca
aaaatttatgtttcagcaacaccttcaaattatgaaattgataaagcagatggcgaagta
attcatcaattaattagacctacaggacttttagatccagttattgaagttcgtccaaca
cattcacaaattgatgaaatttacgatcttttacaagaacaaaaaagtaaaaatgaaaga
actataattctaacaacaagcaaaagatcagctgaagaattaagtagatatctagaaagt
aaaaaacaaaaagtttattatattcattcaacatttacaacatttgaaagagatgatatt
ttaattaaattaagaaaaggtatttatgatgcaatcatagggattaatcttcttagagaa
ggaattgatctaccagaagtttctttagttatagttttaaatgctgatgaagagtctttt
tttagatctaaaacttcattgactcaatttgttggtagagcagctagaagtaatcatgga
aaggctattttctttgcagacaaaataagtaaaagcatggcagccacaattgctgataat
caaagaaacagagcaattcaacaccaatataatctagataataacataaccccaaagcct
gttatcaaaccaataattcaacaaattagagaaaaagatcaaaacaaaattatttcttta
attcataataaaaacaaagaaactaaagcagaaaaagacaaattaattgcttcattgaga
aaacaaatgaaagacgctgctagagaagaaaattatgaattagcaatagaacttcaacaa
gtaatcgctgaattagaacattcttaa
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