Metabacillus hrfriensis: QLQ22_00705
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Entry
QLQ22_00705 CDS
T11108
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mhrf Metabacillus hrfriensis
Pathway
mhrf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QLQ22_00705 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhrf03021
]
QLQ22_00705 (rpoB)
03400 DNA repair and recombination proteins [BR:
mhrf03400
]
QLQ22_00705 (rpoB)
Enzymes [BR:
mhrf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QLQ22_00705 (rpoB)
Transcription machinery [BR:
mhrf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QLQ22_00705 (rpoB)
DNA repair and recombination proteins [BR:
mhrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QLQ22_00705 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
WHZ57962
LinkDB
All DBs
Position
129709..133290
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGDPKYSVEESKERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVA
YVRIDRTRKLPVTVLLRALGFGSDQEITDLFGENEYLRNTLDKDNTESTEKALLEIYERL
RPGEPPTVDNAKSLLDSRFFDPKRYDLASVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EIIAEKDTLIDRRTLDRIIPNLESGVGFRKITPSGGVVEEDVTLQSIKIYAPIDSEGEKV
INVISNAYVEENVKNITPADILSSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRF
GFIETPYRRVDPETGKVTSRIDYLTADEEDNYVVAQANARLADDGSFIDEDIVSRFRGEN
TVMSRDRMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPESPIVGT
GMEYVSGKDSGAAVICKFPGVVEKVEAKNIWVRRYEDVDGVKTKGNLDKYSLLKFIRSNQ
GTCYNQRPIVSVGDEVVKGEILADGPSMEKGELALGRNVMVAFMTWDGYNYEDAIIMSQR
LVKDDVYTSIHIEEYESESRDTKLGPEEITRDIPNVGEDALRNLDDRGIIRVGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFNREDGDE
LPPGVNQLVRAYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPVDIMLNPL
GVPSRMNIGQVLELHLGMAARKLGLHVASPVFDGAREEDVWSTLEEAGMARDAKTVLYDG
RSGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGM
DVKILSSDEKEIEMRDLEDDEEGQQSEGLSLNDQPDDLSSAAMEKEKDAVTKE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtatggacgacaccgccaacgcagaagttatgcacgtatt
agtgaagtgttagaattaccaaatcttattgagattcaaacctcttcctatcagtggttt
cttgatgagggtcttagagaaatgttccaggacatatctcctatcgaagacttcactggt
aacctctcgctagaatttattgattatagtttaggtgatcctaaatattcagtagaggaa
tctaaagagcgcgatgttacctattctgcaccgcttcgtgtgaaggtgcgtttaattaac
aaggaaactggtgaagtaaaagatcaggatgttttcatgggtgatttcccattgatgact
gaaacaggtacatttgtgattaacggtgctgagcgtgttatcgtatcacagctcgtacgt
tcaccaagtgtttattacagcggaaaagtcgataaaaatggtaaaaaaggctttactgca
actgtcattccaaaccgtggcgcttggttagagtacgaaacagatgctaaagatgttgca
tatgtgcgtattgatcgcactcggaaattgccggtaacggttcttttgcgcgcactaggg
tttggctctgatcaagaaatcaccgatcttttcggtgaaaatgaataccttcgcaacaca
cttgataaggacaatacagaaagcacagaaaaagctcttcttgaaatctatgagcgtctg
cgccctggtgagcctccaacagtggataatgcgaagagcttgcttgattcaagatttttt
gatccaaaacgctacgatcttgcaagtgtaggacgctacaagatcaataaaaagcttcat
attaaaaatcgccttttcaaccagcgtcttgcggaaacactggtagaccctgaaactggt
gaaattattgcagaaaaagatactttaattgatagacgcacacttgaccgaatcattcct
aatttagagagtggagtaggcttcagaaaaataacgccatcaggcggagttgttgaagaa
gatgtgacgcttcaatcaattaaaatctatgctcctatcgattcagaaggtgaaaaagtc
attaacgtaatcagcaacgcttatgttgaagagaacgttaaaaatattacgcctgctgac
atcctgtcttccattagttatttctttaacttgcttcatggagtaggagacacagatgat
atcgaccatttaggaaaccgtcgtctgcgttctgtaggggagcttcttcaaaatcaattc
agaatcggtctttcacgtatggagcgtgttgtacgcgagagaatgtccattcaagataca
aatacaattacacctcagcagctgattaacattcgtcctgttattgcgtcaattaaagag
ttcttcggaagctctcagttatcgcagttcatggatcagacgaatccgcttgctgaatta
actcataaacgccgtctgtctgcacttggacctggtggtttaacacgtgaacgtgctgga
tttgaagtgcgtgacgttcattactctcactatggccgcatgtgtccgatcgaaactcct
gagggaccaaacatcggtttgatcaactctctgtcttcatatgctaaagtcaatcgcttt
ggtttcattgaaacgccgtatcgccgcgtggatcctgaaacagggaaagtaacttcccgc
atcgattacttaacagcagatgaagaggataattatgtagttgcccaagcaaacgctcgt
ttagcagatgatggttcattcattgatgaggacatcgtttcccgtttccgcggtgagaac
acagttatgtcccgtgacagaatggattacatggatgtatctcctaaacaggtagtttct
gcagcaacagcatgtatcccgttcctggaaaatgatgactccaaccgtgcccttatggga
gcgaacatgcagcgacaagcagtacctcttatgaaccctgagtctccgattgtcggaaca
ggcatggagtatgtatcaggcaaagactctggtgctgcagtaatctgtaagttccctgga
gtagttgaaaaagtagaagctaaaaacatctgggtacgacgctacgaagatgtggatggc
gtgaaaacaaaaggcaacttagataagtacagccttcttaaattcattcgttctaaccaa
ggtacctgctacaaccagcgtccgattgtaagtgtcggcgatgaagttgttaaaggtgaa
atccttgcagatggaccttctatggaaaaaggcgaattggcacttggacgcaacgttatg
gttgccttcatgacatgggatggctacaactatgaggatgccatcatcatgagtcagcgt
cttgtaaaagatgatgtttatacttctattcatatcgaagaatatgaatcagaatcacgt
gatacaaagcttggacctgaagaaatcacacgcgatatcccgaatgttggagaagatgcg
cttcgcaacttagacgaccgcggtattatccgtgtcggtgcagaagtaaaagacggagat
ctgcttgttggtaaggttacgccaaaaggggtaactgaactgactgcggaagaacgcctg
cttcatgcgatctttggtgaaaaagcaagggaagtccgtgatacttcacttcgtgttcct
cacggaggcggcggtatcgttctggatgttaaagtgttcaaccgtgaagacggagatgaa
cttccacctggagttaaccagttagtccgtgcatacatcgttcagaagcgtaaaatttct
gaaggggataaaatggccggacgtcacggaaacaaaggtgttatctcaagaattcttcct
gaagaagatatgccgtatcttccagacggcacaccggtggatatcatgttaaatccgctg
ggcgttccatctcgtatgaacatcggtcaggtgcttgaactgcatcttggaatggcagcg
cgcaagcttggtttacacgttgcatctccagtatttgatggtgcccgcgaggaagatgtt
tggtcaactcttgaagaagctggcatggcacgcgatgctaaaacagttctttatgatggc
cgttcaggtgaaccgtttgataaccgtgtatcagtaggtatcatgtacatgattaaactt
gcccacatggttgatgataaattgcatgcacgttcaacaggtccttactcacttgttaca
cagcagcctcttggcggtaaagcccaatttggcggacagcgtttcggggaaatggaagta
tgggcacttgaagcttatggcgcagcttatactcttcaagagattctcacagttaagtcg
gatgatgttgttggccgtgtgaaaacgtacgaagcaatcgtcaaaggcgaaaatgttccg
gagcctggggttccagaatcattcaaagtattaattaaagagcttcaaagcttaggtatg
gatgtcaagattctctcaagcgacgaaaaagaaatcgaaatgagagacttagaagatgat
gaagaaggacagcaatcagaaggtttatccttgaatgatcagccggatgatctttcatca
gcagccatggaaaaagaaaaagacgcagttactaaagaatag
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