Metabacillus hrfriensis: QLQ22_02100
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Entry
QLQ22_02100 CDS
T11108
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhrf Metabacillus hrfriensis
Pathway
mhrf03420
Nucleotide excision repair
mhrf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QLQ22_02100 (helD)
03430 Mismatch repair
QLQ22_02100 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhrf03400
]
QLQ22_02100 (helD)
Enzymes [BR:
mhrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QLQ22_02100 (helD)
DNA repair and recombination proteins [BR:
mhrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QLQ22_02100 (helD)
MMR (mismatch excision repair)
Other MMR factors
QLQ22_02100 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
PhoH
AAA_30
DEAD
SLFN-g3_helicase
NACHT
NPHP3_N
AAA_16
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WHZ58188
LinkDB
All DBs
Position
complement(398656..400998)
Genome browser
AA seq
780 aa
AA seq
DB search
MNNELRQEQERLDNVVETITEQIGKLEDETGRRRKEVVHIQKHFWDEVKVNTDTFDDYLE
TIIGLRQQAQALTVSQSTHRHASNRQSVLQRMHKAPYFGRIDFTEEGTQTAEKIYIGIST
LTDTSGENFLIYDWRAPVSSVYYDYPPGPAEYTTPGGVIQGKLEKKWQYIIRAGVVESMF
DTSLTIGDEILQQVLGKGTDKHMHSIVATIQQEQNRIIRHVSGRLLIVQGAAGSGKTSAA
MQRIAYLLYKYRDRLKADQIILFSPNSMFNSYVSNVLPELGEENMQQVTFQEYLYHRLSN
AFQVEDPYEQLEYVLTATEDPSHRTRTESIRFKASALFFETIKTYSQSLELSGMIFKGIK
FRGKPLVSAKQIAERFYSSDTSLRFHNRIEKLTEWLNERIDEMEKSELTKSWVQEEIELL
SKDEYQKAYTYLQKKHGYKEDMLDDYEKEIQVLGRMIVRKKLKPLRKWVRTLRFVNFTEI
YKQLFSNPARIKLWMAGKTPEEWEDICLLTMNMMDEGKLFYEDATPFLLLKEQIQGFQTN
TSIKHVLIDEAQDYSPFQFEFLKRLFPSAKMTVLGDFNQAIFVHASEMADFHTLTGLYGP
DETDAIILSRSYRSTKPITEFTRGLVPDGERITAFERDGEKPVLTQLSDRAELHRRIAST
VADFRQRGYNTIAIICKSAAESTYAYEALGSVEEIKLVKSSSIEYEQGVVVIPAYLAKGI
EFDAVIIYDASAQVYGDESLRRLFYTACTRALHHLQLYSAGEPSPFLQNVPPESFILSLT
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgaacttcggcaggagcaagaacgattggataacgtggtcgagacgatcacg
gagcaaatcggcaagctggaagacgaaactggccggcgtcgaaaagaagtagtccatatt
caaaaacacttttgggatgaagtcaaggttaacacagatacttttgacgattatctcgag
acgatcatcggcttaagacagcaggctcaagccctgaccgtaagccaaagcacccacagg
catgcctccaaccggcaatctgtcctgcagcgtatgcataaagcgccttattttggacgt
atcgatttcactgaagaaggaactcagacagcagaaaaaatctatatcggcatttcaacg
ctaacggatacaagcggagagaacttcctgatttatgactggcgggcgccggtctcgagt
gtctactacgattatccgcccggtccggctgaatacactacacccggaggcgtcattcaa
ggcaagctggagaaaaagtggcaatatatcatccgcgcgggcgtagttgaatcaatgttc
gataccagtctcaccattggagacgagattttacagcaggttctgggcaaaggaacagat
aaacatatgcacagcatagtggccaccattcaacaggagcaaaaccggatcattcggcat
gtcagcggccggctgctcatagtgcaaggcgccgccggcagcggaaagacatcggctgcc
atgcagcggatcgcttacttgctctacaagtatcgagataggctgaaggccgatcaaatc
attctattttcgcctaactcgatgtttaacagctacgtatccaatgtcttgcctgaactc
ggagaagagaatatgcagcaggttaccttccaagaatacttgtaccatcggctgagcaac
gcatttcaagtcgaggatccttatgagcaattggaatatgtgctgactgcaacggaagat
ccttcccaccgtactaggaccgagagcatccgcttcaaggcatcggcccttttttttgag
acaatcaaaacatacagtcagtctctggaattatccggtatgatcttcaaaggaattaaa
ttcagaggaaaaccactagtctccgccaaacaaatcgcggaaaggttttatagcagcgac
acctctctccgctttcacaacaggattgagaagttgacagaatggctaaacgagcgaata
gatgaaatggaaaaatccgagctgaccaagtcgtgggtacaggaagaaatcgaattgctc
agcaaagatgagtatcaaaaggcttatacctacttacagaaaaaacatggctataaggaa
gacatgcttgacgattacgagaaagaaatccaagtgctagggagaatgatcgtccgcaag
aaattgaagccactccggaaatgggttcgaacgcttcgtttcgtcaactttacggaaatc
tacaagcagcttttttccaatccagcgcggatcaaattgtggatggccgggaaaacacct
gaggagtgggaggatatttgtctgttgacaatgaatatgatggacgaaggcaagctgttt
tacgaagatgctactccgtttttacttttgaaagagcagattcaagggtttcagacaaac
acctcaatcaagcacgtgcttatagacgaagcacaagattattctccgtttcaatttgag
tttttgaaacgtttatttccttcggcaaagatgaccgtgctcggagatttcaaccaggct
atattcgtccatgccagcgaaatggccgattttcacaccctcaccggcttatacggaccg
gatgaaacagatgcgataatcttgagccgcagctacaggtccacaaaaccgattaccgaa
tttacacgcggactcgtgcctgacggagaacggattaccgcttttgaacgtgacggcgag
aagcctgtgctgacgcaattgtccgatcgtgccgaactgcaccgccgcatcgcgtctaca
gtcgcagactttcggcagcgtgggtataatacgatcgcgattatatgcaaatccgctgcg
gaaagcacctatgcatacgaggcattgggcagcgtcgaagaaatcaagctggtgaagagc
agctcgattgagtatgagcaaggcgttgttgtcataccggcgtatttagccaaaggcata
gaattcgacgctgtcatcatttatgacgcatctgcgcaagtatacggcgatgagagcctg
cgcagattgttctacaccgcctgcacccgggctttgcatcacttgcagctatacagtgca
ggcgaaccaagtccctttttgcaaaatgttccgccggagagtttcattctgagcttgact
taa
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