Metabacillus hrfriensis: QLQ22_05455
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Entry
QLQ22_05455 CDS
T11108
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mhrf Metabacillus hrfriensis
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhrf03400
]
QLQ22_05455 (addA)
Enzymes [BR:
mhrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QLQ22_05455 (addA)
DNA repair and recombination proteins [BR:
mhrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QLQ22_05455 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_30
AAA_16
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WHZ58787
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All DBs
Position
1096875..1100582
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AA seq
1235 aa
AA seq
DB search
MIPKPSDSQWTDDQWKAIVSSGQDILVAAAAGSGKTAVLVERIIRKIISKENPVDVDRLL
VATFTNASAAEMRNRIGEALEKALKDNPSSLHLRRQLSLLNRAAISTLHSFCLNVVRKYY
YLIDLDPGFRIADETEGQLLIDEVLDDIFEEQYSLADNDAFFDLVDRYTTDRSDTDLQTL
IRALYQFSRSHPNPSMWLDELAKMYSEEERLENLPFFPYLTADISMQLTSSLEKLQRALA
LTEKPGGPAPRAENLTDDIRQVQELIEVRDSWQELAGKMALTSFSRAKACRGSEYSKELL
EQTTALRNSAKKQIEQLQEELFGRSYESHLQDLRELKPVIETLTGLVKLFGARFDEMKKQ
KGIVDFSDLEHYCLQILGTPDELGHLQASEAALDYQNQFKEVLVDEYQDTNLVQETILKL
VAKRGPGNLFMVGDVKQSIYRFRLAEPFLFLSKYKTFSKEGQHSGLRIDLSKNFRSRSEV
IDGTNFLFKQLMGEKVGEVAYDLDAELKLGASYPDSEKMRAELLLINRGKDEEEDDSEDD
APFHPEELQTVQLEARVMAKKIRGMIQDKFQIYDRKIGGTRNITYRDVVILLRSMPWAPQ
IIEEFKQEGIPVYANLSGGYFEATEVAIMMSLLKVIDNPYQDVPLASVLRSPVVGLNTNE
LAIIRTYSKKGAYFEALKIFLAEASIEDAGLSRRLQSFYNQLQTWRELARMGSVSELIWQ
LYRDTKFFNYVGGMPGGKQRQANLRALYDRARQYEATTFRGLFRFLRFIERMQERGDDLG
AARALGEQEDVVRLMTIHSSKGLEFPVVFVAGLARQFNMMDMNKKYLLDKELGFATKLIQ
PSLRISYPTLPLSAMKKKMKIELLSEELRVLYVALTRAKEKLFLVGTLKDAGKTLSDWQN
SMTQEEWLLPDFERAQAKSYLDWIGPALVRHADAERLRENSEETSPFILDHPSRWEVNVM
DEEELYDSQKEEKKYDQEMLSALKNLEPVAQQSDYQDQIKARLSWTYQHQFATVFRSKQS
VSEVKRQQEFRDEYSDETILRTQIDTFMFDRPKFMQKKSLTAAEKGTAMHAVMQQLNLRE
PVTSKNTEQKVQELITKEILTEEQAGSIEIDSIVHFFQTDIGKRLQKADRIEREVPFSYA
LPAEELYEEAMGEHVLIQGVIDCLFEDKDGVVLIDYKTDAIQGKYPGGFQQARPILAKRY
RVQLDLYGKAIEKITTKPLSSKILYFFDGGNVLEI
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgataccgaaaccaagtgacagccagtggacagatgatcaatggaaagcgatcgtctca
agcgggcaggatattcttgtggcagcagctgcaggatcaggaaaaacagcggtgctcgta
gagagaatcatccgcaaaatcatttcaaaagaaaatccggtcgatgtggaccggctatta
gtcgcaactttcacgaatgcttctgcggcagaaatgagaaaccggatcggcgaagctctt
gaaaaagcattgaaggataacccctcttcccttcatttgagaagacagctgtccctttta
aatcgggcagcgatttctacgctgcattccttctgcttgaatgtggtgaggaaatactat
tacttaatcgatttggatccgggcttccggattgcagatgaaacagagggacagctcctg
attgatgaggtgctcgatgatatttttgaagaacaatacagccttgcagataatgatgct
ttttttgatctagtagaccgctatacaacagatagaagtgatacagacttgcagacactt
atacgtgcactctatcaattttcacggtcacatccgaatccttccatgtggcttgacgag
cttgcaaagatgtacagcgaagaagaacggcttgaaaacttgccatttttcccatatctt
acagcagatatatccatgcagcttacaagcagtctcgaaaaactgcagcgggcgcttgca
ctgactgaaaaacctggcggccccgctccgcgtgcggaaaatctgactgatgatatcaga
caggtccaggaactgattgaagtaagggattcttggcaggaattggcggggaaaatggcg
ctgacgtcattttcacgggcaaaggcatgcaggggttctgaatacagcaaggaattgctg
gaacagactacagcgctgcgaaattcagcaaaaaaacagattgaacagctgcaggaagag
ctgtttggacgttcttatgaaagccatttgcaggatttacgggaattaaaacctgtcatt
gaaacacttacagggcttgtgaagctgtttggagcacgttttgatgaaatgaaaaagcaa
aaaggaattgttgatttctcagatcttgagcactactgccttcaaattcttggaacacct
gatgagcttggtcatctgcaggcaagtgaagcagctcttgattatcaaaatcagtttaaa
gaggttcttgtcgatgagtatcaggataccaatcttgttcaggaaaccattctcaagcta
gtagcaaaaaggggtccgggaaacctgtttatggttggggatgtaaaacaatcaatctac
agattccgtcttgctgagccgttcttatttttaagcaaatataaaaccttctcaaaagaa
ggacagcacagcggcctccgcatcgatttatctaaaaacttcagaagccgttcagaagta
atcgacggcacaaactttcttttcaaacagctgatgggagagaaggttggggaagttgca
tacgaccttgatgctgagctgaagcttggggcgtcttatccggattctgagaaaatgcgg
gctgaacttctgcttataaaccgcggcaaagatgaggaagaggacgattcagaggatgat
gcaccattccatcccgaagaacttcagaccgttcagcttgaagcaagagtcatggcaaag
aaaatccgcggcatgattcaggataaatttcagatttatgaccgcaaaatcggcggaacc
cggaacatcacatacagggatgttgtgatcctgctccgctctatgccatgggcgccccaa
attattgaggagtttaagcaggaaggcattcctgtgtatgccaacctctcagggggctat
tttgaagcaacagaagtcgctattatgatgtcactgcttaaagtgattgataatccatac
caggatgttccgcttgcatccgttttaagatcgcctgttgttggactgaatacaaatgaa
ctggcaatcatccggacgtattcaaaaaaaggcgcgtattttgaagcgttaaaaattttc
ttagcagaagcatccatagaagacgctggactcagcagaagactccagtcattttataat
cagctgcaaacatggagggaactcgcccgcatgggctcagtttccgaattaatctggcag
ctgtaccgggatacgaaattttttaattatgtcggaggaatgccgggcggcaagcagcgg
caggcaaatttgcgggcgctttatgacagagcccgccagtatgaagcaacaaccttcaga
ggactttttcgtttccttcgctttatagagcgcatgcaagagcgcggtgatgaccttggt
gctgcaagagctcttggagagcaggaagatgtggtcaggctgatgaccattcacagcagc
aaaggactggagtttccggtcgtattcgttgcagggcttgcaagacagtttaatatgatg
gatatgaataaaaaatatttgctcgataaggaactcggatttgctacgaagctgattcag
ccgtcccttcgaatcagctacccgaccttgccgctctcagccatgaagaaaaagatgaaa
attgaactgctgtcagaagagctccgtgttttgtatgttgctttaacacgggcaaaagag
aaacttttcttagttggcactttgaaagacgcaggaaaaacgctgtctgattggcaaaat
tcaatgacacaagaggagtggctgctcccggattttgaacgggcacaggctaaatcgtat
cttgactggatcggtccggcattagtccggcacgcggatgcagaaaggctcagggagaac
agcgaagagactagtcctttcattctggatcacccatccaggtgggaagtgaacgtaatg
gatgaagaggaactgtatgacagtcaaaaagaggagaaaaagtacgatcaggaaatgcta
agtgcattgaaaaaccttgaacctgttgcacagcagtcagattatcaagatcaaataaaa
gcccggttatcatggacgtatcagcatcagtttgccaccgtattccgttccaagcaatct
gtatcggaagtgaaaaggcagcaggaattcagagatgaatacagtgatgaaaccattctg
cggactcagatagacacctttatgtttgatcgtccaaaattcatgcagaaaaaatcgctc
acggctgcagaaaaagggacagctatgcatgctgtcatgcagcagctcaacctgagagaa
ccggtaacgtccaaaaataccgaacaaaaagtacaagagctaatcacaaaagaaattctg
acggaagaacaggcaggcagcattgagattgactccattgttcattttttccagacggat
atcggaaaaagacttcaaaaagcagaccgaattgagagggaagttcccttcagttatgca
ttgcctgcggaagaactatatgaagaagcaatgggtgaacatgtcttgattcaaggggta
attgactgtttatttgaagacaaagatggtgttgttttgatagattacaaaacagatgcc
attcaaggcaagtatccgggaggatttcagcaggcacgtcctattttagcgaaacgctac
agggttcagcttgatctttacggaaaagccattgaaaaaataacgacgaaacctctttca
tcaaaaattctttacttttttgatggaggaaatgtacttgaaatatag
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