Metabacillus hrfriensis: QLQ22_10965
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Entry
QLQ22_10965 CDS
T11108
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhrf Metabacillus hrfriensis
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhrf03032
]
QLQ22_10965 (topA)
03400 DNA repair and recombination proteins [BR:
mhrf03400
]
QLQ22_10965 (topA)
Enzymes [BR:
mhrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QLQ22_10965 (topA)
DNA replication proteins [BR:
mhrf03032
]
Prokaryotic type
DNA Topoisomerases
QLQ22_10965 (topA)
DNA repair and recombination proteins [BR:
mhrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QLQ22_10965 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
CK_II_beta
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WHZ59815
LinkDB
All DBs
Position
2204770..2206845
Genome browser
AA seq
691 aa
AA seq
DB search
MSDFLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPRSQIGVDTEGNYEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDVDVLSDCRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVAVRLIIDREK
EIKAFVPEEYWTIESQFLKDQDLFDGAFFGINGKKAELKTEADVNDVLNKIKGNNFTVTN
VSKKERKRNPAVPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGMDLGKEGTVGLITYMR
TDSTRISETAQQEAFTFIEQKYGKEFTNTAKKAAKKNSNTQDAHEAIRPTSTLKDPASLK
EFLSRDQLRLYKLIWERFVASQMASAVLDTMSVDLNNNDVMFRANGSKIKFPGFMKVYVE
GNDDGVEEKDRMLPDLQNGDVVYSKDIEPAQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFIPTELGEIVLELIMEFFPEIINVEFTAKMENSLDEIEDGN
VQWVNIIDDFYKDFAKRLEVAENEMEEIEIKDEPAGVDCEECGNPMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVPCPKCEKGNIVERKSKKRRIFYGCDQFPECDFLSWDKPIARSC
PKCDNMLVEKKLKKGMQVQCVNCDYKEEQQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattttttagtgattgtagaatcgccggcaaaagcgaaaacaatcgaacgatat
ctagggaaaaaatataaggttaaagcttctatggggcatgtccgcgatcttccaagaagt
cagatcggcgtagacactgaggggaattacgaaccgaaatatattactattcggggaaaa
gggccggtccttaaagaattaaaaacagcagcaaaaaaagcaaaaaaagtctatctcgca
gctgacccggatcgcgaaggggaagccattgcctggcacctcgctcatagtcttgacgtt
gacgttctgtcagactgccgagttgttttcaatgagataacaaaggatgccattaaagaa
tcatttaaacatcctcgtcccatcaacatggatttagttgatgctcagcaggcgagacgg
attctggacagattagtcggttacaaaatcagcccgattctctggaaaaaagtaaaaaaa
gggttaagtgcgggacgcgttcagtctgttgctgtccgtttaatcattgaccgcgaaaaa
gaaataaaagcatttgttccggaagaatactggacaatagaaagtcaattcttaaaagac
caagatcttttcgatggtgcattctttgggatcaacggaaaaaaagctgaattaaaaacc
gaagctgatgttaacgacgtgttaaataaaatcaaaggcaacaattttacagtcacaaac
gtttcgaaaaaagaaagaaaacgtaatcctgcagtaccatttacaacatccacacttcag
caggaagcggcacgtaaattaaatttcagagcgaaaaagacaatgatgattgcccagcag
ctatacgaaggaatggaccttggaaaagagggaactgtcggtctgattacgtatatgcgt
acagattctacaagaatttccgaaacagcccagcaagaagcatttactttcattgaacag
aaatatggcaaagaatttacgaatacagccaaaaaggctgcgaagaaaaattcaaatacc
caagatgcccatgaggcgatccgccctacttcaactctgaaggatcccgcatctttaaaa
gaattcttaagccgcgatcagctgcgtttatacaaactgatctgggaacgttttgtagca
agtcaaatggcatcggccgtactcgatacaatgagcgtcgatttaaacaataacgatgtg
atgttcagagcaaatggctccaaaattaaatttccgggatttatgaaagtgtatgtcgaa
ggaaatgatgatggagtggaggagaaggaccgcatgcttcctgatttacaaaatggagat
gtggtttattcaaaagatatagaacctgctcagcatttcactcagccacctccgcgatat
acagaggcaagacttgtgaaaacccttgaagagctgggaataggcagaccgtccacttat
gcacctactcttgatacgattcagaaaagaggatatgttgcccttgataataaacgtttt
attccgactgagcttggtgaaatcgttcttgaattgatcatggaatttttccctgaaatc
ataaatgttgaatttacggctaaaatggaaaacagtcttgatgaaattgaagacggaaat
gtacaatgggtcaatatcattgacgatttctacaaagattttgcaaagcgcctggaagtc
gctgaaaatgaaatggaagaaatcgaaattaaagatgaaccggcaggtgttgactgtgaa
gaatgcggcaacccaatggtgtttaagatggggcgttacggaaaattcatggcttgctcg
aatttccctgattgccgcaatacaaaaccgattgtgaaagaaatcggggttccatgtccg
aaatgtgaaaaaggaaatattgtcgaaagaaaatcaaagaaacgccgcattttctatggc
tgtgatcagtttccagaatgtgacttcctatcatgggataaaccgattgcaagatcatgt
ccgaaatgtgataatatgctagttgagaaaaaacttaaaaagggcatgcaggtacagtgc
gtgaactgtgattataaagaagaacagcaaaagtaa
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