Metabacillus hrfriensis: QLQ22_11245
Help
Entry
QLQ22_11245 CDS
T11108
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mhrf Metabacillus hrfriensis
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhrf03016
]
QLQ22_11245 (truB)
Enzymes [BR:
mhrf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QLQ22_11245 (truB)
Transfer RNA biogenesis [BR:
mhrf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QLQ22_11245 (truB)
Prokaryotic type
QLQ22_11245 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
AmiA-like
Motif
Other DBs
NCBI-ProteinID:
WHZ59869
LinkDB
All DBs
Position
2259275..2260189
Genome browser
AA seq
304 aa
AA seq
DB search
MEGVLLINKPAGMTSHDCVAKMRRIAKTKKIGHTGTLDPDVTGVLPVCIGRATKIVEYLT
AASKTYEAEVTLGFSTTTEDASGEVVEKKIVDTVITMKDAEEALHALTGEIDQVPPMYSA
VKIGGKKLYEYARAGQTIERPKRKIRIHEMTILSDIEAKEDTVSFRFKVQCSKGTYVRTL
AVMIGEQLGYPAHMSHLIRTASGPFLIDQCHTFEEIEKKADESSLQDILIPISTALNHLP
KMSINDTLAKKVKNGAVLEVPAGFEHVAAEDSIAVYDEQGTCLAIYKQHPEKPHFLKPSK
VLVI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgttttgttaataaataagcctgctggaatgacctctcatgattgcgtggcc
aaaatgagaaggattgccaaaacgaaaaaaatcggacatacagggacgcttgatccggat
gttacaggggttctgcctgtgtgtattggtcgtgcaacaaagatagttgaatacttaact
gcagcatcaaagacatatgaagcagaagttactttaggcttctcaacgaccacagaggat
gcgtctggcgaagttgttgaaaagaaaatagtggacactgtcattactatgaaagatgcc
gaagaagcgctgcacgctttgacaggtgagattgatcaggttcctccgatgtattcggca
gtgaaaataggcggaaaaaaattgtacgaatacgccagagcaggacagacgattgagagg
ccaaaaagaaaaatcagaattcatgagatgacaatcttatcagacatagaagctaaagaa
gacacggtttcttttcgttttaaagttcaatgttccaaaggtacatatgtaagaacactt
gctgtgatgatcggcgaacaattgggctatcctgcccatatgtcacatttgataagaaca
gcatcaggtccgtttttaattgatcaatgccacacctttgaagaaattgaaaaaaaggca
gatgagagcagcctgcaggatattcttattccaatcagcacagcattaaatcatttgccc
aaaatgtccataaatgatacattagcaaagaaagtgaaaaatggtgctgtgcttgaggtt
ccggctggttttgaacatgttgcggctgaagattcgattgccgtatatgatgaacaggga
acttgcctcgcgatttataagcagcatcctgaaaaacctcacttccttaaaccttccaaa
gtccttgtcatctga
DBGET
integrated database retrieval system
