Metabacillus hrfriensis: QLQ22_16825
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Entry
QLQ22_16825 CDS
T11108
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhrf Metabacillus hrfriensis
Pathway
mhrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QLQ22_16825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhrf03019
]
QLQ22_16825
03400 DNA repair and recombination proteins [BR:
mhrf03400
]
QLQ22_16825
Enzymes [BR:
mhrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QLQ22_16825
Messenger RNA biogenesis [BR:
mhrf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QLQ22_16825
DNA repair and recombination proteins [BR:
mhrf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QLQ22_16825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
DUF1319
CO_dh
Motif
Other DBs
NCBI-ProteinID:
WHZ56349
LinkDB
All DBs
Position
complement(3406907..3408382)
Genome browser
AA seq
491 aa
AA seq
DB search
MNVQEALKRHFGHDTFRTGQENIIIDLIAGNDTIALLPTGGGKSLCYQLPAYILEGTVLI
ISPLLSLMEDQIQQIRMRGEKRVIGLNGALSYMERQKALLNLNQYKYIFASPEILQSEAV
ASALRNINLSLFVVDEAHCISQWGHDFRTDYSKLGELRGKLGQAPCIALTATATPEVLKD
IESSLQMKNAKMHIQSVNRSNIAIMIEECHSLENKMKRVSELVKKLKGPGIIYCSSRKWT
ENLEQFLKMEGVHDTACYHAGMEQEQRTLIQQQFVYDQLEVVCCTNAFGMGVNKGNVRYV
IHFHFPAQMESYVQEIGRAGRDGLPSVAISLIGSGDMEIPLALLESEFSTYEQLHQTLYL
LSAGTEAEEAFERTGVNEFQGRFILHHLEKLSYPLPGNEQQSLNVIWGKIEDRRKFKKRK
LNAVMKWLLSKECRRQGILKYFEEKNLQTQEICCDRCGLDLLQYEEREEKHTHLQLLEWK
AELKAIFGQSE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcaagaagcattaaagcgccatttcggccatgatacctttcgaactggtcag
gaaaacatcatcattgaccttatagccggcaatgatacaatagccctgcttccgactgga
ggagggaaatcactgtgctatcagctgcctgcgtacattctggaaggaacggttctgatc
atttccccgcttctttcactaatggaagatcagatccagcaaattcgaatgcgcggagaa
aaaagggttattggcttaaacggtgctctctcttatatggaaaggcaaaaagcattgctt
aacctgaatcaatacaaatatatttttgcatccccagaaattctgcagtcagaagccgtt
gcttctgcacttcgtaacattaacctatctttatttgttgttgatgaagctcactgcatt
tcacaatggggccatgatttcagaacggattactcaaagctcggtgagttaagaggaaaa
cttggccaggcaccgtgcatagccctgacagcaactgcgactcctgaagtacttaaggat
attgagagttctctgcagatgaagaacgcgaaaatgcatattcaatcagttaatcgcagc
aatatagcaattatgattgaggaatgtcattcgcttgaaaataaaatgaaaagagtttct
gagctggttaaaaagctgaaagggccagggattatatactgctcaagcagaaaatggact
gaaaacctagagcagtttttaaaaatggaaggcgttcatgatacagcctgctatcatgca
gggatggagcaagagcaaaggacccttatacagcagcagtttgtttatgatcaattagaa
gtagtttgctgtacaaatgcatttggaatgggtgttaataaaggaaatgtcagatatgtc
atccattttcattttccggctcaaatggaatcatacgttcaggaaatagggagagctgga
agagacggtctgccaagtgtagcgatatctcttattggaagcggagatatggaaatacca
ctggccctgctggaatcggaattttcaacatatgaacagcttcaccagaccctttatctt
ctctcagcaggtacggaagctgaggaagcatttgaacggactggtgtaaatgaatttcag
ggaaggtttattctgcatcatttagaaaagctttcttatcctctgcccggaaatgaacaa
caatcgttaaatgtaatatggggaaaaattgaagacaggcgaaaattcaaaaagagaaaa
ctaaatgccgtaatgaaatggctgctttcaaaagaatgcaggagacagggcattctcaaa
tactttgaggaaaagaatttacaaacacaggagatttgctgtgacaggtgcggacttgat
cttttgcagtacgaagaaagggaagagaagcatactcatttgcagctccttgagtggaag
gcagaattaaaggctatatttggccagagcgagtga
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