Metabacillus hrfriensis: QLQ22_17985
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Entry
QLQ22_17985 CDS
T11108
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mhrf Metabacillus hrfriensis
Pathway
mhrf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QLQ22_17985 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhrf03021
]
QLQ22_17985 (rpoD)
Transcription machinery [BR:
mhrf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QLQ22_17985 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2316
DUF2408
Motif
Other DBs
NCBI-ProteinID:
WHZ56571
LinkDB
All DBs
Position
complement(3617016..3618128)
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AA seq
370 aa
AA seq
DB search
MADKQTHDSELTLEQAKDQLTEIGKKRGVLTYEEIAERMSGFEIESDQMDEYYEYLGEQG
VELVGDNESTDDPNIQQLAKEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLTADEEI
KLANRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKFDYR
KGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPSPEE
IAEDMDLTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHAAYELLKE
QLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPS
RSKRLKDFLE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaaacccatgattctgaattgacattggaacaagcaaaagaccaatta
actgaaatcggaaaaaaacgtggagttttaacatacgaagagattgctgagcgcatgtct
ggcttcgaaattgaatcagaccaaatggatgagtattatgaataccttggcgagcagggc
gttgaattagttggtgataatgaatcgactgatgatcctaatatacagcagctggcgaag
gaagaagaatttgatctaaatgatttaagcgtgcctccaggtgttaagattaatgatcct
gtccgtatgtatctgaaagaaattggccgggtagatcttttaaccgcagatgaggaaatt
aagcttgcaaaccgcattgaagaaggcgatgaagaagcgaagagaagactcgcagaagca
aaccttcgtcttgttgtaagtatcgctaaaagatatgtcggccgtggtatgctgtttttg
gatcttatccaagaaggcaatatgggcttaatgaaagctgtagagaagttcgattaccgc
aaaggatttaaattcagtacctatgctacttggtggattcgccaggctataacaagagcc
atagctgatcaggcaagaaccattcgtattccggtccacatggttgagacaattaataaa
ttaattcgtgttcagcgtcagcttcttcaggatttaggacgtgaaccatctccggaagaa
attgcagaagatatggatttaactcctgataaagtaagagaaattctaaaaattgctcaa
gaaccggtatctcttgaaacaccaattggtgaagaagatgattcacatcttggagatttt
attgaggatcaagatgcaacttctccttccgaacatgctgcttacgagctgttaaaagaa
cagcttgaagatgtactggatacattgactgaccgtgaagaaaacgttctgcgtcttcgt
ttcggactggatgacggccgtacaagaacacttgaagaagtagggaaagtatttggcgtt
actagagaacgtatccgtcaaattgaagcaaaggcacttcgtaagctgcgccacccaagc
agaagcaaacgattaaaagatttcttagaatag
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