Metabacillus hrfriensis: QLQ22_18470
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Entry
QLQ22_18470 CDS
T11108
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mhrf Metabacillus hrfriensis
Pathway
mhrf03410
Base excision repair
mhrf03430
Mismatch repair
mhrf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QLQ22_18470 (recJ)
03430 Mismatch repair
QLQ22_18470 (recJ)
03440 Homologous recombination
QLQ22_18470 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhrf03400
]
QLQ22_18470 (recJ)
DNA repair and recombination proteins [BR:
mhrf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QLQ22_18470 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QLQ22_18470 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QLQ22_18470 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF7440
bMG1
HTH_22
Motif
Other DBs
NCBI-ProteinID:
WHZ56661
LinkDB
All DBs
Position
complement(3710259..3712607)
Genome browser
AA seq
782 aa
AA seq
DB search
MLKAKTRWDVSNHHPDKADELINTMKVTPLVASLLINRGIETAEQADQFLNIEKHGFLDP
FMLLGMDKTVKRINDAITNQEKILIFGDYDADGVSSTTVLLETLTSLGANADFYIPNRFT
EGYGPNEMAFRHAHDEGFSLIITVDTGISAVNEAALAKELGVDLIITDHHEPGPVLPDAY
AIIHPKQPDCQYPFKELAGVGVAFKLAHALLGKAPEHLLEIAAIGTIADLVPLHGENRLI
ARLGIQQLKRTERKGLKALLKAAGADGKDVNEETIGFAIGPRINAVGRLESADPAVHLLM
SEDDDEAQSLAKDIDLLNKERQKIVSQITEEAIEQVESMYPIEENPVLVLAKEDWNPGVV
GIVASRMVEKYYRPTIILSIDHGKKMAKGSARSIAGFDLFANLSTCRDILPHFGGHPMAA
GMTLDIDDVDQLRQRLNALAAERLTDKDFIPIKTIDAECTLAEITTDSIEEIGLLAPFGM
SNPKPLFLLDSVQLGSMRKIGSDQTHLKLAVEQNHQQLDCIGFGFGHLHDHMAPLAKVSM
VGELSINEWNNFRKPQFMIQDLAVNEWQLFDARGTRNLQKAIEKINDEKNVHIVFQKETL
SMLEGSDLNILFLESGHASGDLDLKDKYVTFIDTPSSIEHLNALFAGARPDRIYAIFHQH
TEHFFATIPTREHFKWYYGFLKQKGSFDLKKHAEALARHKGWSKETIDFMSQVFFDLEFA
TIENGIISVNHHPPKRDLAESTAYASKLQQLELENTLLYSSYQDLKIWFDERMKISSTLV
NA
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaaagcgaagactagatgggatgtttctaaccaccatccggataaggctgatgaa
ttgataaatacgatgaaagttacgcctctggtagcttccctgttaataaatcgcggaatt
gaaactgctgagcaggccgaccaattcctgaatattgaaaagcatggttttttggatcca
ttcatgctccttggaatggacaaaactgttaagcgtattaacgatgcgattactaatcaa
gaaaagattttgatttttggagattatgatgcagatggagtgagctctacgactgttttg
ctcgaaacgcttacctcactcggagctaatgctgatttttatatacctaatcgttttact
gaaggatatggtccaaatgagatggctttccgccatgctcatgatgaaggtttttcttta
atcattacggttgatacagggatctcggctgtgaatgaagcagctcttgcaaaagagctg
ggcgttgatctgatcataaccgatcatcatgaaccaggaccggttcttcctgatgcttat
gcgattatccatccaaagcagcctgattgccaatatcctttcaaagagttagccggtgtg
ggcgtagcttttaagcttgcccatgcactgcttggcaaagcaccagagcatttgcttgaa
attgccgcaataggaaccatcgcggaccttgttccgcttcacggcgagaatcggctgatt
gcacgccttggcattcagcaattaaaacgtacagaacgaaaagggttaaaagcgctgctt
aaagcagcaggagctgatggaaaagatgtaaatgaagagacgattggatttgccatcggt
ccgcggatcaatgccgtagggaggctggaatctgctgatccggccgttcatctccttatg
tcagaagatgatgatgaggcacaaagtcttgcaaaagacattgacttgctcaataaagaa
agacagaaaatcgtctcgcaaattacggaagaggcaatcgaacaagtagaatccatgtat
ccgattgaagaaaatccggttcttgttctagcaaaagaagattggaaccccggcgttgtc
ggaattgtagcttcgagaatggtagagaaatattatagacctacgattatcttaagcatt
gaccacggcaagaaaatggctaaaggatctgcaagaagcattgcgggttttgatttattt
gctaatttgtcaacatgccgggacattctgccgcatttcggaggacatccaatggcagct
ggaatgacacttgatattgatgatgttgaccaattgagacagcgattgaatgcccttgcg
gctgagaggctgactgacaaagatttcatacccatcaaaacgattgatgcggaatgtact
cttgctgaaatcactacggactccatcgaagaaattgggctgctcgctccgtttggcatg
agcaacccgaagcctctcttcctgcttgactccgttcaattagggtcaatgaggaagata
gggtcagatcaaacacatttgaaactggcggttgaacaaaatcatcagcagctcgactgt
atcggattcggatttgggcatcttcatgatcatatggcccctcttgcaaaagtgtcaatg
gttggtgaattatctattaatgaatggaataacttccggaagccgcaattcatgatccag
gatctcgctgtcaatgagtggcagctgtttgatgcaagaggaacccgcaatcttcaaaaa
gcgattgaaaaaataaatgatgaaaaaaatgtccatatcgttttccaaaaagaaacgctc
tctatgcttgaaggctcggatctcaatattctatttttggaaagcggccatgcttcgggc
gacttggatttaaaagataaatatgtcacattcattgacacgccatcttctatagaacat
ctgaatgccctttttgcaggagcgcgcccggaccggatctatgcaatttttcatcagcat
acggaacatttttttgccacaataccaacgagggaacacttcaaatggtattatggattt
ttgaaacaaaaagggtcatttgacttaaaaaaacatgcagaagcgcttgcccggcataaa
ggctggtcaaaagaaacaatagatttcatgtcacaggtgttttttgacctggaatttgct
acaatagagaatggcattatttctgtcaatcatcatccgccaaaaagagatctagccgaa
tctactgcgtatgcttctaagcttcagcaattagagcttgaaaatacgctactatattcg
tcataccaggatttaaaaatatggtttgatgaaagaatgaaaatatcgtcaacgcttgtc
aatgcatga
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