Metabacillus hrfriensis: QLQ22_20625
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Entry
QLQ22_20625 CDS
T11108
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mhrf Metabacillus hrfriensis
Pathway
mhrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QLQ22_20625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhrf03019
]
QLQ22_20625
03009 Ribosome biogenesis [BR:
mhrf03009
]
QLQ22_20625
Enzymes [BR:
mhrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QLQ22_20625
Messenger RNA biogenesis [BR:
mhrf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QLQ22_20625
Ribosome biogenesis [BR:
mhrf03009
]
Prokaryotic type
rRNA helicases
QLQ22_20625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
NAT10_TcmA_helicase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WHZ57039
UniProt:
A0ACD4R9C3
LinkDB
All DBs
Position
complement(4140978..4142423)
Genome browser
AA seq
481 aa
AA seq
DB search
MSHKGFIDYKLSAEIVRALDRLNYTEPTEVQNKVIPVALEKKDLVVKSQTGSGKTASFGI
PLCEMVEWEENKPQALILTPTRELAAQVKEDITNIGRFKRIKAAAVYGKQPFDRQKIELK
QKTHVVVGTPGRVLDHIEKGTLALEKLQYLIIDEADEMLNMGFIDQVEAIIDELPADRVT
MLFSATLPKDVENLCHKYMKKPVEIEIKAAGLTTASIEHSLIVVREDEKFPLLKAVTVVE
NPDSCIIFCRTQEQVDAVFKQLDRANYPCDKIHGGLYQEDRFSVMNDFKRGKFRYLVATD
VAARGIDIDNITHVINYDLPLEKESYVHRTGRTGRAGKTGKAITFITPYEEKFLTEIEDY
IGFEIPRTLAPASEDISKAKGAFEEKIISRPEIKKDKSAQLNKGIMKLYFNGGKKKKIRA
VDFVGTIAKIPGMTAGDIGIITIQDNVSYVEILNGKGPIVLKAMKNTTIKGKLLKVHEAN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataaagggtttattgattataaattaagcgcggagattgtgagggcgctggat
cgtttaaattatacggaaccgacagaagttcagaataaagtcattcctgtcgctttagaa
aagaaggatcttgttgtgaaatcacaaacagggagcgggaagacggcgtcgtttggcatt
ccgctctgtgaaatggtggagtgggaggaaaacaagcctcaagctttaattctgacccca
acaagggagctcgctgcacaggtaaaagaggatataacaaacatcggcaggttcaaacgg
ataaaagcggcagccgtctatggcaaacagccatttgacaggcagaaaattgagctgaag
caaaagactcatgttgtagtcggaacacccggaagagtccttgatcatattgaaaaaggg
acgcttgcgttagaaaagctgcagtatctgattattgacgaagcggatgaaatgctgaat
atgggctttatcgatcaggtagaagcgattattgatgaacttcctgcggacagagttaca
atgctcttttcagctactttaccaaaggatgtagaaaatctctgccataaatatatgaaa
aaaccggttgaaattgagataaaagctgcaggactgacgactgcatcaattgaacattcg
ttaattgtggtgagagaagatgagaagttcccgcttcttaaagctgtgactgtcgttgaa
aaccctgacagctgcatcatcttctgcagaacacaagagcaggttgatgccgtttttaaa
caattagaccgcgccaattatccttgtgataaaattcatggcggcctttatcaggaagat
cgcttttctgtcatgaatgatttcaaaagggggaaattccgctatttagttgcgacagat
gtcgccgccagaggaatcgatattgataatattacacacgtcattaactatgacctgccg
cttgaaaaagaaagctatgttcacagaactggcagaacgggccgggcaggcaaaacagga
aaagcgattaccttcattacgccctatgaggaaaaattccttaccgaaattgaagattat
atcggctttgaaattcctagaacacttgcccctgcgagcgaagatatttctaaagcaaaa
ggtgcattcgaagaaaaaataatatcccgtcctgaaattaaaaaagacaaaagcgcccag
ctgaataaaggaattatgaagctctatttcaacggaggaaagaaaaagaaaatccgtgct
gtcgatttcgtcggaacgatcgccaagattcccggaatgacagcaggcgacatcggcatc
atcaccattcaggataacgtttcttatgtagagattctaaatggaaaaggaccaatcgtt
ttgaaagcaatgaagaatacaacgattaaaggcaagcttttgaaagttcatgaagcgaat
aaataa
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