Metabacillus hrfriensis: QLQ22_24065
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Entry
QLQ22_24065 CDS
T11108
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mhrf Metabacillus hrfriensis
Pathway
mhrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QLQ22_24065 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhrf03021
]
QLQ22_24065 (rho)
03019 Messenger RNA biogenesis [BR:
mhrf03019
]
QLQ22_24065 (rho)
Transcription machinery [BR:
mhrf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QLQ22_24065 (rho)
Messenger RNA biogenesis [BR:
mhrf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QLQ22_24065 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_22
AAA
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WHZ57680
LinkDB
All DBs
Position
complement(4861198..4862481)
Genome browser
AA seq
427 aa
AA seq
DB search
MSEVSISNLEHMKLKELYELARHYKISYYSKLTKKELIFAILKANAEQEDLLFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLYPNRQIILETKPNDLSTRIMDVIAPVGFGQRGLIVAPPK
AGKTMLLKEIANSVTTNHPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIK
VAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAEKRIFPAIDIR
RSGTRKEELLIPREHLEKLWAIRKSMSDSPDFAEKFLKKLRNSKSNEEFFSILDAEWKAA
GVSGKRL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtttcaatttccaatctcgaacatatgaaattaaaagagttatatgaactt
gcgcgtcattataaaatttcatattacagtaaactgacaaaaaaagaattgatctttgcc
attttaaaagcaaacgctgaacaagaggacttattgttcatggaaggcgttcttgaaatt
attcaatcagagggatttgggttcttaagacctatcaattattccccgagttctgaagat
atctatatttcagcttcgcaaatccgccgttttgatttaagaaacggagacaaggtttcc
ggtaaagtgcgtccgccgaaggaaaatgaacgctattacggattgcttcacgtagaggca
gtaaatggggacgaccctgaatctgcaaaagagcgtgttcattttccggctttgacaccg
ctgtacccgaacagacaaattattcttgaaacaaaaccaaatgacctttcgacacgcatc
atggacgtgattgctcctgttggatttggacagcgcggactaatcgttgctcctcctaaa
gcgggtaaaacgatgctattaaaagaaatcgctaacagtgtgacaacgaatcatcctgaa
gctgaattgatcgttcttcttatcgatgagcgtcccgaggaagtaacggatattgaacgt
tctgtagcgggcgatgtcgtgagctcaacatttgatgaagttcctgagaaccatatcaaa
gttgcagagctcgtacttgaacgtgcaatgcgccttgtcgagcataagaaagacgtcatc
atccttatggacagcatcactcgccttgcgcgtgcttataaccttgttattccgccaagc
ggacgtacgctgtcaggcggcatcgatccggctgcgtttcaccgtccgaagcggtttttt
ggagcggcaagaaacattgaagaaggcggcagcctgacaattcttgcaacagctctagta
gatacaggttcacgtatggatgatgtgatttatgaggagtttaaaggaacgggcaacatg
gaacttcaccttgatcgttctcttgctgaaaaacgcatcttcccggcaatcgatatccgc
cgttctggaacgcgtaaagaagaattgcttattcctagagagcatcttgaaaaactttgg
gcgatccgcaaatcaatgtcagattcacctgactttgctgaaaaattccttaaaaaattg
cgtaattcaaaatccaatgaagaattcttcagcattttggatgctgaatggaaagcggca
ggtgtctcgggaaaacgattgtaa
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